Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 ZNF321P-202ENST00000550843 495 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 RPL23AP84-201ENST00000571193 464 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AP000403.1-201ENST00000603349 851 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AL645944.1-201ENST00000603857 493 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AC091965.4-201ENST00000607691 587 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AC107214.2-201ENST00000608204 634 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AC140725.3-201ENST00000616193 880 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 AC009159.2-201ENST00000617603 606 ntBASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAPPC4Q9Y296 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 RNY4P24-201ENST00000362735 96 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC080125.1-201ENST00000414888 684 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 Z85995.1-201ENST00000415547 335 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AL593851.1-201ENST00000426171 157 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 MTCO3P45-201ENST00000443036 613 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 RPS20P20-201ENST00000460498 340 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AP001486.1-201ENST00000463339 476 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 RPS15AP36-201ENST00000492022 382 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 CDC42P4-201ENST00000510507 563 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 RNU6-840P-201ENST00000517275 65 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 LRRC34P1-201ENST00000542742 915 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 ACTR3BP3-201ENST00000565577 979 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC026790.2-201ENST00000606282 430 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC004908.2-201ENST00000609090 574 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC087683.2-201ENST00000611384 326 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC010133.1-201ENST00000615809 842 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC131159.1-201ENST00000621854 213 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC068880.5-201ENST00000624331 290 ntBASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAPPC4Q9Y296 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
TRAPPC4Q9Y296 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
TRAPPC4Q9Y296 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.28□□□□□ -2.05
TRAPPC4Q9Y296 AL365361.1-201ENST00000566942 3481 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC007785.2-201ENST00000598627 1916 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AP000568.1-201ENST00000282964 442 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 RNU6-270P-201ENST00000364131 105 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 TXNP7-201ENST00000406296 293 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 UBE2FP1-201ENST00000416536 447 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 SPA17P1-201ENST00000416656 452 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL451054.2-201ENST00000420896 202 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC011233.1-201ENST00000422812 283 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL049734.2-201ENST00000441066 616 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 CBWD4P-201ENST00000445695 655 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC108938.1-201ENST00000451204 136 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 RNU6-420P-201ENST00000458780 107 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 RNU7-59P-201ENST00000459101 61 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL049873.1-201ENST00000480540 376 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 RNU6-1282P-201ENST00000516735 96 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC106782.4-201ENST00000568264 210 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL353778.1-201ENST00000603149 408 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 Z99289.3-201ENST00000605586 594 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC063944.3-201ENST00000609969 533 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC004223.4-201ENST00000612426 332 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 SDR42E1P2-201ENST00000614861 481 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC112204.3-201ENST00000623822 332 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 OR5H6-203ENST00000642105 978 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC010680.1-201ENST00000590024 3590 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AL049641.1-201ENST00000441055 1948 ntBASIC2.27□□□□□ -2.05
TRAPPC4Q9Y296 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 RNA5SP68-201ENST00000363885 119 ntBASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 RNU6-741P-201ENST00000383889 107 ntBASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 RNU5A-2P-201ENST00000384337 116 ntBASIC2.26□□□□□ -2.05
TRAPPC4Q9Y296 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms