Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 RPS15AP34-201ENST00000487776 387 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 EIF4EP3-201ENST00000498782 656 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 RNA5SP165-201ENST00000517142 115 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 MTND2P32-201ENST00000521584 1038 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC243972.3-201ENST00000539655 198 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 MIR3117-201ENST00000584034 78 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC098826.3-201ENST00000603823 466 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC091965.4-201ENST00000607691 587 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC245517.5-201ENST00000611529 162 ntBASIC2.58□□□□□ -2
CHMP2BQ9UQN3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
CHMP2BQ9UQN3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RNU6-278P-201ENST00000390945 109 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 OR6C5P-201ENST00000452388 923 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RPF2P2-201ENST00000504693 896 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC020699.1-201ENST00000505161 445 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC002456.2-201ENST00000509356 380 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 DEFB108A-201ENST00000530110 222 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 MIR4307-201ENST00000582802 84 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC103710.1-201ENST00000610003 901 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC034102.8-201ENST00000615146 484 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 AC073346.2-201ENST00000624724 2058 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CHMP2BQ9UQN3 ELF2P3-201ENST00000445099 1506 ntBASIC2.57□□□□□ -2
CHMP2BQ9UQN3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RNU6-512P-201ENST00000364438 103 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RN7SKP226-201ENST00000364912 300 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 Y_RNA.302-201ENST00000364997 102 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RNU1-73P-201ENST00000383971 164 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 SNORA80E-201ENST00000384744 137 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL360182.1-201ENST00000397433 468 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RPL17P12-201ENST00000413391 526 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL022400.1-201ENST00000423946 935 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC105272.1-201ENST00000438604 198 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC011825.1-201ENST00000484967 388 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC098591.2-201ENST00000510152 315 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RNU1-103P-201ENST00000516502 125 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 MIR4999-201ENST00000585029 91 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AL161756.2-201ENST00000604597 246 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 AC021755.4-201ENST00000616620 456 ntBASIC2.56□□□□□ -2
CHMP2BQ9UQN3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CHMP2BQ9UQN3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 UBE2L2-201ENST00000254302 429 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AL391994.1-201ENST00000254724 282 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 MTCO2P17-201ENST00000424336 677 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 MED14P1-201ENST00000430517 648 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 UBE2FP3-201ENST00000436366 524 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
CHMP2BQ9UQN3 AC034244.1-201ENST00000507687 207 ntBASIC2.55□□□□□ -2
CHMP2BQ9UQN3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms