Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC103975.1-201ENST00000482506 483 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC007115.1-201ENST00000546853 234 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC068135.2-201ENST00000569293 1028 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 MIR4307-201ENST00000582802 84 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 DUXAP4-201ENST00000603046 613 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AP000787.2-201ENST00000604432 568 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC093424.1-201ENST00000604999 338 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AL136363.1-201ENST00000605349 337 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 SNHG22-203ENST00000617833 660 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC068880.5-201ENST00000624331 290 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AP000676.4-201ENST00000624659 623 ntBASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CLCF1Q9UBD9 AC008669.1-201ENST00000565823 2178 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC099654.7-201ENST00000635788 2127 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RNU1-105P-201ENST00000363470 161 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RNU6-660P-201ENST00000364566 109 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RNA5SP126-201ENST00000365092 109 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 XGY1-201ENST00000381172 446 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RNU6-140P-201ENST00000384566 108 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 MIR518C-201ENST00000384822 101 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 CCNG1P1-201ENST00000406783 885 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 USP9YP20-201ENST00000419224 558 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 MTCYBP39-201ENST00000437562 491 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC108059.3-201ENST00000456388 214 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RNU7-23P-201ENST00000459465 62 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AL160314.1-201ENST00000490836 438 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC138853.1-201ENST00000503549 823 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RAC1P5-201ENST00000512182 576 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 MTND5P13-201ENST00000513046 1079 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RN7SKP24-201ENST00000515888 284 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RN7SKP287-201ENST00000516546 266 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 RPL7P20-201ENST00000520308 745 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AL512310.1-201ENST00000548639 172 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC007621.1-201ENST00000604544 437 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC239868.4-201ENST00000608318 671 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 OR10AB1P-201ENST00000609613 938 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 AC110079.1-202ENST00000635213 138 ntBASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLCF1Q9UBD9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 RNU5A-8P-201ENST00000364102 114 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 RNU1-109P-201ENST00000383960 147 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 U8.14-201ENST00000390843 143 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 RNA5SP354-201ENST00000391247 136 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL445529.1-201ENST00000398713 389 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC080125.1-201ENST00000414888 684 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL139413.1-201ENST00000421309 217 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 HMGN2P30-201ENST00000423237 256 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AL365496.1-201ENST00000426885 215 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 RPL37P21-201ENST00000435890 276 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC005094.1-201ENST00000440420 368 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 RPL23AP58-201ENST00000440453 469 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC020550.1-201ENST00000447385 163 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC013267.1-201ENST00000458227 267 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC010486.1-201ENST00000511793 424 ntBASIC2.26□□□□□ -2.05
CLCF1Q9UBD9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms