Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NCKIPSDQ9NZQ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-108P-201ENST00000365558 107 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-74P-201ENST00000384235 107 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 MIR1-2-201ENST00000384961 85 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 MT-TL1-201ENST00000386347 75 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 TXNP7-201ENST00000406296 293 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008850.1-201ENST00000427546 362 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC093156.1-201ENST00000440382 670 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RBMY2UP-201ENST00000453474 324 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 HMGN2P7-201ENST00000456186 273 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RN7SL807P-201ENST00000470923 297 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC079382.1-201ENST00000493346 557 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AL359273.1-201ENST00000510918 627 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-390P-201ENST00000516259 103 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-835P-201ENST00000516974 104 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-64P-201ENST00000517119 105 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 OR4H12P-201ENST00000556269 907 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 NCAPGP2-201ENST00000557911 754 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC005730.3-201ENST00000583067 366 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 MIR3922-201ENST00000585192 84 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC105224.1-201ENST00000587055 421 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AP001029.3-201ENST00000588063 596 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008752.3-201ENST00000588113 712 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC060780.3-201ENST00000589464 80 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC006077.1-201ENST00000604746 343 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC106900.2-201ENST00000604994 317 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AP003355.3-201ENST00000623465 114 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC010733.2-201ENST00000589496 5702 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NCKIPSDQ9NZQ3 AC032011.1-201ENST00000611703 1549 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 MTND4P29-201ENST00000503122 1372 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 CBX3P1-201ENST00000325243 554 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-451P-201ENST00000362921 107 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RNA5SP267-201ENST00000364893 126 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RNVU1-14-201ENST00000384770 164 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU2-9P-201ENST00000410194 145 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC091390.3-201ENST00000426478 338 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 GTF2IP20-201ENST00000431663 360 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL606489.2-201ENST00000433886 234 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 GPR143P-201ENST00000434155 205 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC005019.1-201ENST00000436455 431 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 MTCO3P45-201ENST00000443036 613 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AP000852.1-201ENST00000472460 573 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 HSPE1P6-201ENST00000479457 291 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL36AP51-201ENST00000487216 318 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL049874.1-201ENST00000489560 388 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-507P-201ENST00000516045 100 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AP006245.1-201ENST00000522549 120 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AP001804.3-201ENST00000525146 880 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC123904.3-201ENST00000547218 814 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC011611.1-201ENST00000552179 197 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL359212.1-201ENST00000556608 614 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms