Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC118273.1-201ENST00000525324 3006 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 Y_RNA.295-201ENST00000364918 102 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-108P-201ENST00000365558 107 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 MIR23B-201ENST00000384832 97 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-754P-201ENST00000391166 107 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RPS4XP8-201ENST00000402039 771 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 UBE2FP1-201ENST00000416536 447 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC079780.1-201ENST00000428259 207 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC005094.1-201ENST00000440420 368 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 WASF1P1-201ENST00000447560 1131 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 SSXP4-201ENST00000451349 245 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-420P-201ENST00000458780 107 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RPL21P41-201ENST00000459863 264 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RPL21P129-201ENST00000491732 478 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC109635.3-201ENST00000529536 185 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC104383.1-201ENST00000530297 370 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AP003034.1-201ENST00000534621 422 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC011611.1-201ENST00000552179 197 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AL157687.1-201ENST00000554853 619 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC034105.3-201ENST00000565294 442 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4293-201ENST00000584305 78 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AP001330.5-201ENST00000607176 411 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC093788.1-201ENST00000609356 927 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC093838.1-201ENST00000613014 469 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AL450472.3-201ENST00000615578 367 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 AL136164.4-201ENST00000625013 2135 ntBASIC3.31□□□□□ -1.88
SMARCAL1Q9NZC9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 Y_RNA.38-201ENST00000362617 102 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 Y_RNA.89-201ENST00000363031 102 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-511P-201ENST00000363496 107 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1097P-201ENST00000363586 107 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-534P-201ENST00000364877 106 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-74P-201ENST00000384235 107 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU2-36P-201ENST00000410361 191 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 CCDC58P2-201ENST00000417131 366 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AL606489.2-201ENST00000433886 234 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RPL35AP22-201ENST00000436855 335 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 HMGB1P31-201ENST00000437242 427 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 HMGB3P12-201ENST00000438745 556 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 BNIP3P2-201ENST00000441221 577 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 FDX1P2-201ENST00000450769 375 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 SNRPGP6-201ENST00000451124 220 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RPL31P58-201ENST00000469001 379 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 PRDX4P1-201ENST00000507189 574 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC026801.2-201ENST00000515352 425 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1281P-201ENST00000516223 105 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 FAM60DP-201ENST00000524174 632 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AP003072.2-201ENST00000527756 676 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC123904.3-201ENST00000547218 814 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 NCAPGP2-201ENST00000557911 754 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 MIR548S-201ENST00000581352 82 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AL121992.2-201ENST00000606262 256 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC008536.2-201ENST00000607284 349 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC002553.4-201ENST00000616896 331 ntBASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.3□□□□□ -1.88
SMARCAL1Q9NZC9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 ZNF680P1-201ENST00000436625 1469 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMARCAL1Q9NZC9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms