Protein–RNA interactions for Protein: Q9NXX6

NSMCE4A, Non-structural maintenance of chromosomes element 4 homolog A, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4AQ9NXX6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NSMCE4AQ9NXX6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
NSMCE4AQ9NXX6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NSMCE4AQ9NXX6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.18□□□□□ -1.9
NSMCE4AQ9NXX6 AC026241.1-201ENST00000517873 2142 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 U3.4-201ENST00000363352 213 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 RPS3AP36-201ENST00000398190 775 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 RNU2-46P-201ENST00000517038 113 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC073544.2-201ENST00000601155 540 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 SEPT7P9-203ENST00000604116 343 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NSMCE4AQ9NXX6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 SNORD116-8-201ENST00000384365 95 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 RNU6-750P-201ENST00000390946 107 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC080125.1-201ENST00000414888 684 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 HMGN2P31-201ENST00000432430 273 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC104850.1-201ENST00000435940 476 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC098831.1-201ENST00000440661 216 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 MTATP6P7-201ENST00000453315 681 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 Vault.3-201ENST00000516676 95 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 NCAPGP2-201ENST00000557911 754 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 Z94722.1-201ENST00000604328 474 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AL451064.1-201ENST00000607718 471 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AL161734.1-201ENST00000609720 557 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC091304.9-201ENST00000612091 226 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 AC008147.4-201ENST00000617570 1204 ntBASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NSMCE4AQ9NXX6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NSMCE4AQ9NXX6 NACAP2-201ENST00000318548 624 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RNA5SP274-201ENST00000410484 108 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 BX323014.1-201ENST00000412876 237 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC096649.2-201ENST00000416186 393 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 ISCA1P6-201ENST00000427740 390 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 SETP8-201ENST00000435341 628 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 PGBD4P3-201ENST00000440731 581 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RPS27AP8-201ENST00000452665 445 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC119751.5-201ENST00000514077 770 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RNU6-914P-201ENST00000516749 109 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC022616.3-201ENST00000523940 148 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 GLYCAM1-201ENST00000546596 285 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC103810.1-201ENST00000579873 453 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 MIR3922-201ENST00000585192 84 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC006130.2-201ENST00000586202 326 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC174048.1-201ENST00000603389 144 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AL137843.1-201ENST00000605078 385 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AL392048.1-201ENST00000613946 534 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AP001506.1-201ENST00000615444 211 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AL603839.4-201ENST00000624658 1005 ntBASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NSMCE4AQ9NXX6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NSMCE4AQ9NXX6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms