Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 RPL23AP89-201ENST00000439324 255 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 GZMAP1-201ENST00000503054 631 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 RNU1-95P-201ENST00000516357 160 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 RNU1-128P-201ENST00000516704 160 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC026403.1-201ENST00000518938 295 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AL137161.1-201ENST00000532231 390 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 YPEL5P3-201ENST00000547227 352 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 AL137100.2-201ENST00000555786 315 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 MIR3128-201ENST00000581957 66 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 MIR6128-201ENST00000615528 109 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC009093.8-201ENST00000641769 292 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 AL356489.2-201ENST00000566968 3528 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG3Q9NT62 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG3Q9NT62 ZNF734P-201ENST00000419494 1534 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 AC011978.2-201ENST00000569835 2054 ntBASIC5.22□□□□□ -1.57
ATG3Q9NT62 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.22□□□□□ -1.57
ATG3Q9NT62 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATG3Q9NT62 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
ATG3Q9NT62 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ATG3Q9NT62 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ATG3Q9NT62 MAPK10-372ENST00000641954 3413 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG3Q9NT62 Y_RNA.117-201ENST00000363294 101 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 RNU6-82P-201ENST00000363970 107 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 Y_RNA.234-201ENST00000364409 97 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 U3.11-201ENST00000364476 212 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG3Q9NT62 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG3Q9NT62 EIF4E2P1-201ENST00000393781 255 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 SYF2P2-201ENST00000417620 583 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AL590233.1-201ENST00000430017 456 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 RNU6-1132P-201ENST00000459214 107 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.21□□□□□ -1.58
ATG3Q9NT62 RPL7P49-201ENST00000471402 708 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC135001.1-201ENST00000544546 283 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC092447.9-201ENST00000603395 144 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC004805.2-201ENST00000605382 482 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 SNORD58B-201ENST00000607313 66 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC010378.1-201ENST00000619270 362 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 MIR6715B-201ENST00000637172 77 ntBASIC5.21□□□□□ -1.58
ATG3Q9NT62 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG3Q9NT62 AC011460.1-201ENST00000636268 1834 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG3Q9NT62 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG3Q9NT62 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 Y_RNA.60-201ENST00000362831 98 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 RNU6-490P-201ENST00000362985 107 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 RNU6-593P-201ENST00000364716 112 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 Y_RNA.288-201ENST00000364854 92 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 Y_RNA.493-201ENST00000384422 102 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 MIR7-3-201ENST00000384898 110 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 MT-TW-201ENST00000387382 68 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AL391417.1-201ENST00000404100 426 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 RNU6-1050P-201ENST00000410388 107 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 SNORA57.3-201ENST00000411095 141 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 RPL23AP83-201ENST00000434984 473 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC016065.2-201ENST00000514530 444 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC100770.1-201ENST00000532310 322 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 GNAI2P1-201ENST00000541815 315 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 CYCSP30-201ENST00000546447 172 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 RPL23AP87-202ENST00000573039 466 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC025627.2-201ENST00000576220 160 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC024619.4-201ENST00000580924 316 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC078899.3-201ENST00000599065 212 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 AC243312.2-201ENST00000623340 601 ntBASIC5.2□□□□□ -1.58
ATG3Q9NT62 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG3Q9NT62 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
ATG3Q9NT62 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms