Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-1225P-201ENST00000516336 65 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 RNA5SP24-201ENST00000516478 95 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AP005435.4-201ENST00000529514 284 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MIR3614-201ENST00000581261 86 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MIR4713-201ENST00000582691 75 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AL390838.2-201ENST00000602394 274 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC078880.5-201ENST00000617845 421 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC091304.6-201ENST00000619761 202 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 AC099063.3-201ENST00000642066 185 ntBASIC0.98□□□□□ -2.25
CDC42SE1Q9NRR8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 SPRR2C-201ENST00000290702 219 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AL161781.1-201ENST00000354277 403 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-236P-201ENST00000363886 106 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 U3.19-201ENST00000390893 196 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 RNA5SP212-201ENST00000391223 107 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC127391.1-201ENST00000411737 98 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 USP9YP6-201ENST00000413550 854 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 OR51A5P-201ENST00000415429 942 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC244035.1-201ENST00000430042 390 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 KRTAP8-2P-201ENST00000440620 186 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 OR6C5P-201ENST00000452388 923 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC092001.1-201ENST00000453012 261 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 RN7SL168P-201ENST00000463821 279 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 RPL36AP48-201ENST00000485521 314 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-678P-201ENST00000516832 109 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC009812.2-201ENST00000517657 457 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC104072.1-201ENST00000568817 668 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 MIR5708-201ENST00000579723 85 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 MIR3618-201ENST00000580330 88 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 NDUFA8P1-201ENST00000605525 367 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AL109618.2-201ENST00000605527 211 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC069545.1-201ENST00000605671 358 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC012467.1-201ENST00000607740 256 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 MIR6780B-201ENST00000610307 79 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AL355365.1-201ENST00000616480 294 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 MIR6134-201ENST00000617606 109 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC013470.4-201ENST00000619978 986 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 WWP1P1-201ENST00000466609 2769 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
CDC42SE1Q9NRR8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL356292.1-201ENST00000283110 373 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MIR561-201ENST00000385216 97 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 SNORA40.19-201ENST00000390846 128 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL049693.1-201ENST00000402760 611 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 NDUFB4P4-201ENST00000404822 243 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MTND3P20-201ENST00000407663 186 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RNU2-48P-201ENST00000410694 191 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MTCO2P1-201ENST00000424648 477 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 GPM6BP2-201ENST00000432046 144 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RPL36AP53-201ENST00000432891 316 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL353706.1-201ENST00000436728 494 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MTCO1P53-201ENST00000441633 699 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MTCYBP42-201ENST00000444653 1130 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 GPM6BP1-201ENST00000446387 144 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 FABP5P13-201ENST00000452144 328 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC008481.1-201ENST00000463278 396 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC010631.1-201ENST00000474150 156 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RPL21P99-201ENST00000480369 423 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms