Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-875P-201ENST00000516488 106 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 SNORD60.2-201ENST00000516883 86 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 CENPUP1-201ENST00000526649 1202 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC015917.1-201ENST00000579654 510 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC006116.10-201ENST00000591836 581 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC006077.1-201ENST00000604746 343 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AC110801.1-201ENST00000623590 212 ntBASIC3.71□□□□□ -1.82
USP29Q9HBJ7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.71□□□□□ -1.82
USP29Q9HBJ7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 CBX3P1-201ENST00000325243 554 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RNU6-61P-201ENST00000365528 109 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 MIR183-201ENST00000384958 110 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RNU6-903P-201ENST00000391270 109 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 MTATP6P4-201ENST00000427725 675 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 SRIP2-201ENST00000428470 166 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 CYCSP43-201ENST00000438233 310 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RPL26P6-201ENST00000440913 438 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 PRDX3P3-201ENST00000447765 522 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL118520.1-201ENST00000450770 291 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RPS29P15-201ENST00000458329 171 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC010285.1-201ENST00000470580 392 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AP000852.1-201ENST00000472460 573 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 EIF4EP3-201ENST00000498782 656 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 RNA5SP309-201ENST00000516670 106 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AF038458.1-201ENST00000588406 262 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC010525.2-201ENST00000590920 195 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC007687.1-201ENST00000602704 304 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL161756.2-201ENST00000604597 246 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 BNIP3P10-201ENST00000605360 577 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC096577.2-201ENST00000611455 153 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC104985.2-201ENST00000620598 500 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AC011155.2-201ENST00000623202 216 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 FRG1KP-201ENST00000623592 341 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 MFSD8-236ENST00000641509 4050 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL133383.2-201ENST00000622958 2336 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 AL354685.2-201ENST00000448218 1447 ntBASIC3.7□□□□□ -1.82
USP29Q9HBJ7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 MTND5P1-201ENST00000445440 1375 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 MIR218-2-201ENST00000385006 110 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 RNU2-41P-201ENST00000410991 178 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 RAC1P6-201ENST00000423911 575 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC012498.1-201ENST00000424037 437 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 ZNF863P-201ENST00000426746 417 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC098614.3-201ENST00000438957 440 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 TXNP1-201ENST00000441872 371 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 MRPS31P2-201ENST00000451581 518 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 RN7SL432P-201ENST00000484057 298 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 RPL38P4-201ENST00000502376 214 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC025465.4-201ENST00000513422 638 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC046134.1-201ENST00000514454 666 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 RNU2-58P-201ENST00000516403 183 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 OR5AL2P-201ENST00000532185 920 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 NCAPGP2-201ENST00000557911 754 ntBASIC3.69□□□□□ -1.82
USP29Q9HBJ7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.69□□□□□ -1.82
USP29Q9HBJ7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms