Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 snoU13.8-201ENST00000458890 104 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RPS3AP22-201ENST00000488297 769 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 RPL23AP49-201ENST00000492925 468 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 LTV1P1-201ENST00000510683 1237 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC025881.1-201ENST00000518851 512 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AP000867.2-201ENST00000532468 320 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 OR5BN1P-201ENST00000532955 829 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 AL031667.3-201ENST00000620124 655 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 SDAD1P2-201ENST00000441308 2028 ntBASIC2.52□□□□□ -2.01
NXF3Q9H4D5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NXF3Q9H4D5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC092447.10-201ENST00000620607 1652 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 Y_RNA.18-201ENST00000362461 102 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 RNU6-289P-201ENST00000364093 107 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 Y_RNA.234-201ENST00000364409 97 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AL356320.1-201ENST00000429616 163 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 MTND1P20-201ENST00000430341 950 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 RPS6P15-201ENST00000431996 751 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC018634.1-201ENST00000437554 401 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 FAM103A2P-201ENST00000444122 354 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 PAXBP1P1-201ENST00000449315 447 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 RPS29P21-201ENST00000496272 170 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 MRPS33P3-201ENST00000513456 322 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC025281.1-201ENST00000567026 265 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC072039.2-201ENST00000608883 439 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC091304.6-201ENST00000619761 202 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AL356596.1-201ENST00000624230 379 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC068880.5-201ENST00000624331 290 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
NXF3Q9H4D5 AC005832.2-201ENST00000538921 1430 ntBASIC2.51□□□□□ -2.01
NXF3Q9H4D5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 Y_RNA.302-201ENST00000364997 102 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 MIR320C1-201ENST00000408566 88 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 RPL23AP39-201ENST00000415533 405 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 MTND4P20-201ENST00000424125 869 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 CETN4P-201ENST00000432407 469 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AL117351.1-201ENST00000438864 766 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AL513124.1-201ENST00000450410 614 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 SNORD121B-201ENST00000458838 81 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 MTND1P22-201ENST00000510572 951 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 RNU6-678P-201ENST00000516832 109 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 RNU6-714P-201ENST00000516963 103 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC008015.1-201ENST00000555505 465 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC009163.5-201ENST00000575421 637 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC019226.2-201ENST00000625973 424 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC007671.2-201ENST00000637344 619 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NXF3Q9H4D5 AC008669.1-201ENST00000565823 2178 ntBASIC2.5□□□□□ -2.01
NXF3Q9H4D5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 AC010680.1-201ENST00000590024 3590 ntBASIC2.49□□□□□ -2.01
NXF3Q9H4D5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 AC135776.4-201ENST00000624300 1904 ntBASIC2.49□□□□□ -2.01
NXF3Q9H4D5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 SNORA25.6-201ENST00000364121 118 ntBASIC2.49□□□□□ -2.01
NXF3Q9H4D5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NXF3Q9H4D5 AF228730.1-201ENST00000397972 663 ntBASIC2.49□□□□□ -2.01
NXF3Q9H4D5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms