Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC125611.1-201ENST00000549563 229 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 MIR4765-201ENST00000585007 77 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC103710.1-201ENST00000610003 901 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC004009.2-201ENST00000623016 728 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC005832.2-201ENST00000538921 1430 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 WWP1P1-201ENST00000466609 2769 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 RNU6-7-201ENST00000364784 107 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 RNU6-8-201ENST00000365467 107 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 SNORA70.4-201ENST00000365509 134 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 RNU6-748P-201ENST00000384648 107 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 MIR506-201ENST00000384998 124 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL033519.2-201ENST00000403958 392 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL356131.1-201ENST00000405826 414 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 RPS3AP25-201ENST00000411660 793 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC009963.1-201ENST00000417265 157 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL357134.1-201ENST00000445848 426 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 MTND2P24-201ENST00000453434 806 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC026410.2-201ENST00000460281 156 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 RPS15AP17-201ENST00000470598 390 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC007182.2-201ENST00000489251 402 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC010460.2-201ENST00000509054 677 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 SNORA31.22-201ENST00000517204 135 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VCX3BQ9H321 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC090330.1-201ENST00000588646 764 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC068790.3-201ENST00000602988 553 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL391813.1-201ENST00000603098 260 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AC004853.1-201ENST00000604902 698 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 AL354696.1-201ENST00000614652 497 ntBASIC1.63□□□□□ -2.15
VCX3BQ9H321 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VCX3BQ9H321 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 ZNF355P-201ENST00000427301 3216 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 RNU6-354P-201ENST00000383862 107 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 RNU6-468P-201ENST00000384003 109 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 RNU6-76P-201ENST00000384060 104 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 RNU6-610P-201ENST00000384264 107 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 SNORA40.19-201ENST00000390846 128 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 MIR888-201ENST00000401186 77 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 POLHP1-201ENST00000411806 470 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 FO393414.1-201ENST00000428697 1184 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 SLC25A15P5-201ENST00000508033 253 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 MRPS33P3-201ENST00000513456 322 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 AC044913.1-201ENST00000557200 430 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 AC098483.2-201ENST00000603158 454 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 SRGNP1-201ENST00000603392 451 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 AL138478.1-201ENST00000612252 832 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
VCX3BQ9H321 MIR219B-201ENST00000637023 88 ntBASIC1.62□□□□□ -2.15
VCX3BQ9H321 RNU6-1300P-201ENST00000391046 108 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 CCDC58P2-201ENST00000417131 366 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 AL590233.1-201ENST00000430017 456 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 AL445646.1-201ENST00000431784 216 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 MTND4P15-201ENST00000437913 1033 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.61□□□□□ -2.15
VCX3BQ9H321 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.61□□□□□ -2.15
VCX3BQ9H321 MRPL42P4-201ENST00000453267 443 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
VCX3BQ9H321 TPT1P8-201ENST00000510120 555 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.61□□□□□ -2.15
VCX3BQ9H321 AP003066.2-201ENST00000529375 555 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.61□□□□□ -2.15
VCX3BQ9H321 AC010975.3-201ENST00000618727 978 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 AC084824.4-201ENST00000620106 731 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 YWHAEP7-203ENST00000622054 312 ntBASIC1.61□□□□□ -2.15
VCX3BQ9H321 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VCX3BQ9H321 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VCX3BQ9H321 AC006020.1-201ENST00000420179 1854 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VCX3BQ9H321 RNU6-486P-201ENST00000363116 107 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 Y_RNA.126-201ENST00000363382 111 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 RNU6-207P-201ENST00000384137 107 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 SNORA48.7-201ENST00000391302 135 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 AC018630.2-202ENST00000422992 927 ntBASIC1.6□□□□□ -2.15
VCX3BQ9H321 FAM204CP-201ENST00000424489 642 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms