Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 CCT4P2-201ENST00000233836 1548 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 MIR518C-201ENST00000384822 101 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 MIR888-201ENST00000401186 77 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL162578.1-201ENST00000406202 378 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC013267.1-201ENST00000458227 267 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC106872.3-201ENST00000495104 446 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 SNORA3.4-201ENST00000515969 96 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC060771.1-201ENST00000582031 164 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL031281.1-201ENST00000604049 488 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC008498.1-201ENST00000613012 531 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AL139418.1-201ENST00000613613 177 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 MIR6817-201ENST00000615588 66 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 U4.3-201ENST00000621047 82 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AP002791.1-201ENST00000623291 381 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AP000676.3-201ENST00000623299 569 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 AC007490.1-201ENST00000624321 703 ntBASIC2.78□□□□□ -1.96
CCSER1Q9C0I3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 SNORA4.1-201ENST00000364263 144 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 RNU1-39P-201ENST00000383897 165 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 TAS2R15P-201ENST00000390674 928 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 MIR1305-201ENST00000408300 86 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC009414.1-201ENST00000427200 443 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 TXNL1P1-201ENST00000429528 554 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AP000542.1-201ENST00000448473 371 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC008481.1-201ENST00000463278 396 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 RPS15AP36-201ENST00000492022 382 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 MTCYBP35-201ENST00000503630 1137 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC022447.3-201ENST00000506865 495 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AP003461.1-201ENST00000528866 78 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC068587.4-201ENST00000533893 186 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AL391261.3-201ENST00000557194 520 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC009094.1-201ENST00000564443 426 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 FTX_3.1-201ENST00000610451 147 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AL136981.2-201ENST00000617319 734 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC080100.1-201ENST00000624239 5356 ntBASIC2.77□□□□□ -1.97
CCSER1Q9C0I3 AC104454.1-201ENST00000421341 1401 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 U8.8-201ENST00000365399 135 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SNORA67.4-201ENST00000384688 142 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 PIGPP2-201ENST00000411569 458 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 USP9YP13-201ENST00000417797 480 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 AL008629.1-201ENST00000438615 184 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 TPT1P14-201ENST00000448018 505 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 RPL23AP35-201ENST00000451906 501 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 RPL37P6-201ENST00000460682 294 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 LTV1P1-201ENST00000510683 1237 ntBASIC2.76□□□□□ -1.97
CCSER1Q9C0I3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms