Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 YWHAQP7-201ENST00000603536 658 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AL603758.1-201ENST00000618654 241 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 SNORD39.4-201ENST00000620099 78 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RMST_7.1-201ENST00000621935 268 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 U6.105-201ENST00000637379 88 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.384-201ENST00000383909 102 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.394-201ENST00000383942 103 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU2-62P-201ENST00000410868 191 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RPS15AP12-201ENST00000419498 388 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC007283.2-201ENST00000424739 197 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 EZH2P1-201ENST00000431167 291 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 CKS1BP5-201ENST00000434172 273 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RPS20P5-201ENST00000434808 360 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 HMGB3P30-201ENST00000457863 606 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU6-329P-201ENST00000459618 107 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 EIF4EP3-201ENST00000498782 656 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC091885.1-201ENST00000506658 268 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU1-143P-201ENST00000516296 146 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU6-1314P-201ENST00000517139 104 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC005668.1-201ENST00000571142 476 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 MIR4504-201ENST00000577413 92 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC006557.5-201ENST00000603126 811 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 U1.23-201ENST00000610293 146 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC093913.1-201ENST00000614178 329 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNU1-68P-201ENST00000615382 146 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL391261.4-201ENST00000616012 481 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AL355365.1-201ENST00000616480 294 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC009318.4-201ENST00000620496 486 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 U1.39-201ENST00000621562 146 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC079597.1-201ENST00000624306 508 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC090617.10-201ENST00000624308 134 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 AC073346.2-201ENST00000624724 2058 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.07□□□□□ -1.76
SALL3Q9BXA9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SALL3Q9BXA9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.100-201ENST00000363141 102 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.234-201ENST00000364409 97 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AL591416.1-201ENST00000404015 867 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 BX323014.1-201ENST00000412876 237 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC093578.1-201ENST00000415219 368 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AL645937.1-202ENST00000421799 937 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 HMGN2P26-201ENST00000463169 339 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC021382.1-201ENST00000483523 359 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC093767.1-201ENST00000504523 156 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 KLHL2P1-201ENST00000508691 521 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 FTH1P9-201ENST00000513251 355 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 RNU6-327P-201ENST00000516270 127 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 RN7SKP256-201ENST00000517201 314 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC104027.1-201ENST00000521887 300 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 PSMA2P1-201ENST00000526365 646 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC021646.1-201ENST00000605469 484 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AL022345.1-201ENST00000607292 135 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC104237.2-201ENST00000612456 443 ntBASIC4.06□□□□□ -1.76
SALL3Q9BXA9 AC004825.2-201ENST00000616634 455 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms