Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL590084.1-201ENST00000407885 387 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 NDUFS5P4-201ENST00000412983 318 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC107081.1-201ENST00000414975 361 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 SRIP2-201ENST00000428470 166 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 SNRPEP9-201ENST00000436794 238 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC090515.1-201ENST00000465295 476 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AL121769.1-201ENST00000469473 401 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 LINC00888-204ENST00000487386 421 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC022493.1-201ENST00000492984 337 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC008413.1-201ENST00000511864 177 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 RNU6-150P-201ENST00000516237 95 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 SNRPGP18-201ENST00000553000 214 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC078814.3-201ENST00000553036 491 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AGGF1P5-201ENST00000567900 919 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 MTND4LP25-201ENST00000570218 163 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 MIR3199-1-201ENST00000582434 88 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC025588.2-201ENST00000604851 466 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AL158211.2-201ENST00000607282 395 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC009090.3-201ENST00000616553 565 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AL031601.2-202ENST00000622650 282 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AP002791.1-201ENST00000623291 381 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 OR1S1-201ENST00000624470 978 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC126544.2-201ENST00000625174 749 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 AC110491.1-201ENST00000562191 2010 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AL390862.1-201ENST00000635467 1469 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 Y_RNA.245-201ENST00000364493 95 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MIR218-1-201ENST00000384999 110 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 BTF3P7-201ENST00000407097 488 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 UBE2FP1-201ENST00000416536 447 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MICF-203ENST00000432679 129 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC098831.1-201ENST00000440661 216 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MTND1P31-201ENST00000449206 961 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC092902.1-201ENST00000486999 259 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC113347.3-201ENST00000509113 148 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 RNY4P37-201ENST00000516225 96 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AP005902.1-201ENST00000521358 186 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 OR5AQ1P-201ENST00000527596 927 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC118942.1-201ENST00000529674 1035 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC010186.2-204ENST00000537668 439 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AL512347.1-201ENST00000566420 503 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MIR1273D-201ENST00000577266 86 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC061975.8-201ENST00000587058 721 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.59□□□□□ -2.15
UPK3BQ9BT76 APOOP1-201ENST00000604695 592 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC004805.2-201ENST00000605382 482 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AL021997.1-201ENST00000605757 193 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC093673.2-201ENST00000609674 331 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC046143.2-201ENST00000609789 160 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 MIR7157-201ENST00000635801 60 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 AC099063.3-201ENST00000642066 185 ntBASIC1.59□□□□□ -2.15
UPK3BQ9BT76 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
UPK3BQ9BT76 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.59□□□□□ -2.16
UPK3BQ9BT76 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.59□□□□□ -2.16
UPK3BQ9BT76 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC069528.2-201ENST00000624849 1991 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 SNORA3.2-201ENST00000408221 125 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 BTF3L4P3-201ENST00000418879 476 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 UBE2FP3-201ENST00000436366 524 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MTATP6P7-201ENST00000453315 681 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 TRBV12-1-201ENST00000479785 344 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RPS15AP36-201ENST00000492022 382 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RPS27AP10-201ENST00000496103 208 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC016550.1-201ENST00000505348 785 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 MTND2P31-201ENST00000512602 616 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.58□□□□□ -2.16
UPK3BQ9BT76 AC110760.3-202ENST00000515177 371 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RNU6-390P-201ENST00000516259 103 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 RNA5SP281-201ENST00000516504 135 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 SCARNA3-201ENST00000517097 143 ntBASIC1.58□□□□□ -2.16
UPK3BQ9BT76 DEFB131D-201ENST00000526803 184 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms