Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AL445687.1-201ENST00000439946 251 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 HIGD1AP2-201ENST00000446367 280 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AC107626.1-201ENST00000471084 183 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXC2Q99958 RNA5SP458-201ENST00000516188 119 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 RN7SKP265-201ENST00000516448 223 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXC2Q99958 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 MIR3117-201ENST00000584034 78 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AL139344.1-201ENST00000605228 195 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AL592221.1-201ENST00000605266 382 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AC008498.1-201ENST00000613012 531 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 TUG1_2.1-201ENST00000614234 87 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC010133.1-201ENST00000615809 842 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC013470.4-201ENST00000619978 986 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 MIR7515-201ENST00000637837 67 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXC2Q99958 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
FOXC2Q99958 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
FOXC2Q99958 RNU1-35P-201ENST00000362782 153 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 RN7SKP226-201ENST00000364912 300 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 TAS2R15P-201ENST00000390674 928 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 MIR888-201ENST00000401186 77 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 TXNP7-201ENST00000406296 293 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 RNU4-26P-201ENST00000410270 107 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AL451074.5-201ENST00000415894 435 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 RPLP0P7-201ENST00000416050 667 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AL451054.2-201ENST00000420896 202 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXC2Q99958 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 TXNL1P1-201ENST00000429528 554 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 MTND1P32-201ENST00000433043 938 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC112220.1-201ENST00000434628 355 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 ST13P20-201ENST00000447996 1065 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 DPPA3P1-201ENST00000448050 469 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 GSTA11P-201ENST00000452866 669 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AC008571.1-201ENST00000467232 300 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AC024589.1-201ENST00000512207 263 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 RNU5A-4P-201ENST00000516588 111 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 RANP3-201ENST00000530970 276 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXC2Q99958 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FOXC2Q99958 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 MTND1P24-201ENST00000552175 861 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 MIR1273D-201ENST00000577266 86 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AC239868.4-201ENST00000608318 671 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC090115.4-201ENST00000609970 188 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 AC097478.2-201ENST00000610572 514 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXC2Q99958 AP000484.1-201ENST00000620067 1252 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
FOXC2Q99958 ZNF876P-202ENST00000398732 1485 ntBASIC2.2□□□□□ -2.06
FOXC2Q99958 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
FOXC2Q99958 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXC2Q99958 RPL9P7-201ENST00000330965 580 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RNU6-744P-201ENST00000365557 107 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RNU1-73P-201ENST00000383971 164 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RNU6-1316P-201ENST00000384242 108 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
FOXC2Q99958 PIGPP2-201ENST00000411569 458 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AC023141.4-201ENST00000412031 328 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 RPS24P7-201ENST00000416921 246 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXC2Q99958 USP9YP13-201ENST00000417797 480 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 SNRPEP7-201ENST00000438350 220 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXC2Q99958 USP9YP10-201ENST00000454868 628 ntBASIC2.19□□□□□ -2.06
FOXC2Q99958 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXC2Q99958 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXC2Q99958 RPL7P18-201ENST00000478965 734 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms