Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 RBBP8P1-201ENST00000449447 1844 ntBASIC5.62□□□□□ -1.51
PHOX2BQ99453 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHOX2BQ99453 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.62□□□□□ -1.51
PHOX2BQ99453 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 SNORA29-201ENST00000384183 140 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 RNU6-1145P-201ENST00000384246 107 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 Y_RNA.497-201ENST00000384447 98 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 RNU6-1154P-201ENST00000391001 104 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 RNU6-159P-201ENST00000391080 106 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 Z82210.1-201ENST00000440037 231 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 AC010285.1-201ENST00000470580 392 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 MIR4270-201ENST00000581799 70 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 BPIFA4P-203ENST00000603168 689 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 AC008568.2-201ENST00000623862 2313 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHOX2BQ99453 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.61□□□□□ -1.51
PHOX2BQ99453 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHOX2BQ99453 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 RNU6-1290P-201ENST00000362957 109 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 SNORD115-8-201ENST00000363856 82 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 SNORD115-38-201ENST00000365037 82 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 RNU6-449P-201ENST00000383914 107 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 DDX39BP1-205ENST00000422507 192 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 AC004975.1-201ENST00000428733 208 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 WARS2P1-201ENST00000429678 537 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AC005042.3-201ENST00000453230 174 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 RPL21P129-201ENST00000491732 478 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 RN7SL447P-201ENST00000494711 245 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AC107918.3-201ENST00000533272 382 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 AP006289.1-201ENST00000538089 277 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 RPL21P9-201ENST00000556149 474 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 MIR4284-201ENST00000578924 81 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 MIR4308-201ENST00000580634 81 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AC010632.3-201ENST00000611377 369 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AL109809.4-201ENST00000603520 2185 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 AL079305.1-201ENST00000623159 3008 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.6□□□□□ -1.51
PHOX2BQ99453 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PHOX2BQ99453 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHOX2BQ99453 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHOX2BQ99453 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 SNORA66-201ENST00000384792 133 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 MIR329-1-201ENST00000385028 80 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 COX6B1P1-201ENST00000415962 213 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 OOSP1P1-201ENST00000423265 274 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC243964.1-201ENST00000441814 261 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC023141.8-201ENST00000442554 208 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC009237.8-201ENST00000445492 379 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 MTATP6P7-201ENST00000453315 681 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC020890.1-201ENST00000491837 504 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC005840.1-201ENST00000498412 377 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 AL391261.3-201ENST00000557194 520 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 MIR132-201ENST00000591554 101 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC136601.2-201ENST00000604356 474 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 AC068831.7-201ENST00000616954 363 ntBASIC5.59□□□□□ -1.51
PHOX2BQ99453 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PHOX2BQ99453 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHOX2BQ99453 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PHOX2BQ99453 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.51
PHOX2BQ99453 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms