Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RPL31P3-201ENST00000458430 332 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 RNU7-59P-201ENST00000459101 61 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC117522.2-201ENST00000510049 657 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 FABP5P5-201ENST00000515537 406 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEK1Q96PY6 ELOCP29-201ENST00000588193 334 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AF038458.1-201ENST00000588406 262 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC112191.3-201ENST00000604371 277 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC131902.3-201ENST00000611767 581 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC009487.2-201ENST00000420969 6821 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 RNU6-799P-201ENST00000363567 107 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 RNU1-39P-201ENST00000383897 165 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SNORD116-9-201ENST00000384000 95 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SNORD116-3-201ENST00000384287 95 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SNORD116-7-201ENST00000384404 95 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SNORD116-5-201ENST00000384462 95 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL109755.1-201ENST00000401791 649 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL590004.2-201ENST00000404787 371 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC018630.2-202ENST00000422992 927 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 RPL7L1P10-201ENST00000427790 463 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL590383.1-201ENST00000428602 75 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 ELOCP30-201ENST00000447108 299 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL049714.1-201ENST00000466686 347 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 RPL30P14-201ENST00000482744 348 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEK1Q96PY6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 RNU6-390P-201ENST00000516259 103 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC022878.1-201ENST00000530684 149 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 ZNF861P-201ENST00000588126 639 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL359999.1-201ENST00000604513 294 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC005046.1-201ENST00000608515 625 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC108747.1-201ENST00000609508 535 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AP000254.1-201ENST00000609934 520 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEK1Q96PY6 AC009878.1-201ENST00000621819 340 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 AL136313.1-201ENST00000624804 202 ntBASIC3.31□□□□□ -1.88
NEK1Q96PY6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK1Q96PY6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 SNORD115.1-201ENST00000391109 76 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 RPL7P10-201ENST00000417407 739 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 SEPT2P1-201ENST00000419651 180 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 AL365338.1-201ENST00000422282 858 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 MTND1P28-201ENST00000435623 950 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 TIMM9P1-201ENST00000436122 256 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 MTCO2P16-201ENST00000436962 677 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC108059.3-201ENST00000456388 214 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC114797.1-201ENST00000514003 728 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 SNORA9.3-201ENST00000516383 129 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 DEFB108A-201ENST00000530110 222 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 MIR3146-201ENST00000580367 79 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 MIR3605-201ENST00000583214 100 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 BNIP3P8-201ENST00000597863 560 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC245517.5-201ENST00000611529 162 ntBASIC3.3□□□□□ -1.88
NEK1Q96PY6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.3□□□□□ -1.88
NEK1Q96PY6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEK1Q96PY6 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 MIR26A1-201ENST00000362205 77 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 Y_RNA.77-201ENST00000362962 107 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 RNY4P16-201ENST00000364768 94 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NEK1Q96PY6 SNORA36C-201ENST00000384289 132 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 RPL21P75-201ENST00000396599 483 ntBASIC3.29□□□□□ -1.88
NEK1Q96PY6 AL445529.1-201ENST00000398713 389 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms