Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC027309.2-201ENST00000520566 192 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AP005597.4-201ENST00000526762 229 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC136601.2-201ENST00000604356 474 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC016925.2-201ENST00000605108 242 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 BX322635.1-201ENST00000605804 496 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC064859.1-201ENST00000624741 174 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RNU6-338P-201ENST00000383888 105 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RNU6-140P-201ENST00000384566 108 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 MIR525-201ENST00000384978 85 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RNA5SP212-201ENST00000391223 107 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RPL23AP29-201ENST00000397284 453 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RN7SKP101-201ENST00000411376 320 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 POLHP1-201ENST00000411806 470 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 UBE2FP1-201ENST00000416536 447 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC009238.1-201ENST00000442165 424 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC009237.6-201ENST00000446969 424 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RPS20P22-201ENST00000473700 357 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 TRBV1-201ENST00000476502 284 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 COX7A2P2-201ENST00000505291 250 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RNU6-760P-201ENST00000516078 97 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 ARL2BPP5-201ENST00000523141 481 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC084851.1-201ENST00000529105 249 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC110588.1-201ENST00000559699 137 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 RPAP2P1-201ENST00000603626 1168 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL355802.4-201ENST00000607635 548 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AC009032.1-201ENST00000617574 431 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 AL590808.1-201ENST00000618696 141 ntBASIC1.2□□□□□ -2.22
AP1S3Q96PC3 ZNF876P-202ENST00000398732 1485 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 CDC27P3-201ENST00000635418 1910 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 MIR583-201ENST00000384846 75 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 SNORA3.2-201ENST00000408221 125 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 RNA5SP508-201ENST00000411327 119 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 MTND2P29-201ENST00000438595 412 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC098831.1-201ENST00000440661 216 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AL357134.1-201ENST00000445848 426 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC005832.2-201ENST00000538921 1430 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 SULT1C2P1-202ENST00000562418 459 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 MIR4672-201ENST00000583126 81 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC018638.7-201ENST00000605836 1114 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC096586.1-201ENST00000610267 561 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC091304.6-201ENST00000619761 202 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC084768.2-201ENST00000622736 221 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 AC007490.1-201ENST00000624321 703 ntBASIC1.19□□□□□ -2.22
AP1S3Q96PC3 RNU6-251P-201ENST00000363235 104 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 RNU1-42P-201ENST00000364033 160 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 RNU6-619P-201ENST00000365146 108 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 Z98749.2-208ENST00000381646 500 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 MCTS2P-201ENST00000394552 546 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AL356131.1-201ENST00000405826 414 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 SNORA11-201ENST00000408789 128 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 RPS24P7-201ENST00000416921 246 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 FO393415.2-201ENST00000480085 343 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 RPS27AP10-201ENST00000496103 208 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC098862.1-201ENST00000504991 413 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.18□□□□□ -2.22
AP1S3Q96PC3 TPT1P8-201ENST00000510120 555 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 AC010486.1-201ENST00000511793 424 ntBASIC1.18□□□□□ -2.22
AP1S3Q96PC3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms