Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 SCARNA17.1-201ENST00000516211 143 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 SCARNA17.2-201ENST00000516334 143 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AL359212.1-201ENST00000556608 614 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 SCARNA17.4-201ENST00000614296 143 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC010608.3-201ENST00000625048 527 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 RNU6-462P-201ENST00000362659 105 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 RN7SKP226-201ENST00000364912 300 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 SNORA67.4-201ENST00000384688 142 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MIR144-201ENST00000384886 86 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 CCNG1P1-201ENST00000406783 885 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 RN7SKP266-201ENST00000410232 287 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 PTENP1-201ENST00000447117 1215 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC133134.1-201ENST00000466800 359 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AL160314.1-201ENST00000490836 438 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 EIF4EP3-201ENST00000498782 656 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MTCYBP43-201ENST00000513621 740 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 RNA5SP24-201ENST00000516478 95 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AL133153.1-201ENST00000557756 303 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC022662.1-201ENST00000580252 331 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC061975.8-201ENST00000587058 721 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC103810.6-201ENST00000606708 136 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AL136981.2-201ENST00000617319 734 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC112204.3-201ENST00000623822 332 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 AC068057.2-201ENST00000624047 895 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 MIR7515-201ENST00000637837 67 ntBASIC2.47□□□□□ -2.01
RPRD1AQ96P16 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPRD1AQ96P16 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RNA5SP289-201ENST00000362332 137 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 XGY1-201ENST00000381172 446 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RNU6-636P-201ENST00000384598 107 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 ELOCP9-201ENST00000418624 239 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AL139413.1-201ENST00000421309 217 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AL445669.1-201ENST00000426743 755 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 MTND3P1-201ENST00000441336 220 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC020550.1-201ENST00000447385 163 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 USP9YP25-201ENST00000457708 443 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC010631.1-201ENST00000474150 156 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC105252.1-201ENST00000503089 286 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RNU6-390P-201ENST00000516259 103 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RNA5SP290-201ENST00000517133 127 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AP003122.3-201ENST00000526316 255 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 OR5BN1P-201ENST00000532955 829 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AL356280.1-201ENST00000603614 379 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC135507.1-201ENST00000607214 561 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC106052.1-201ENST00000608029 497 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC239868.4-201ENST00000608318 671 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AL449363.1-201ENST00000617815 186 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AP000676.3-201ENST00000623299 569 ntBASIC2.46□□□□□ -2.02
RPRD1AQ96P16 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPRD1AQ96P16 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 ZNF29P-201ENST00000225587 168 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 SNORA4.1-201ENST00000364263 144 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 SNORD114-30-201ENST00000364448 72 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 RNU1-52P-201ENST00000384190 164 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 MIR19A-201ENST00000384878 82 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 SNORA11.2-201ENST00000408318 127 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 PIGPP2-201ENST00000411569 458 ntBASIC2.45□□□□□ -2.02
RPRD1AQ96P16 AL359704.1-201ENST00000411586 781 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms