Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF48Q96MX3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF48Q96MX3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF48Q96MX3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF48Q96MX3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC244517.1-201ENST00000606030 2086 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU1-14P-201ENST00000362759 152 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 SNORD113-7-201ENST00000363762 77 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNA5SP175-201ENST00000364275 119 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL445189.1-201ENST00000405722 338 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU6-985P-201ENST00000410182 104 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU6-954P-201ENST00000411355 107 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RPS12P24-201ENST00000412619 387 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RBMY1KP-201ENST00000423480 476 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 SKA2P1-201ENST00000425592 390 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 COX6B1P7-201ENST00000430845 235 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC005019.1-201ENST00000436455 431 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 TXNP1-201ENST00000441872 371 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 SNORD121B-201ENST00000458838 81 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC010285.1-201ENST00000470580 392 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 PPBPP1-201ENST00000510807 373 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RNU2-10P-201ENST00000516375 211 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC009902.1-201ENST00000519351 183 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC090136.1-201ENST00000520009 240 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AP000763.2-201ENST00000540641 163 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL160290.3-201ENST00000604869 165 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 Z82243.1-201ENST00000609432 473 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AL021997.2-201ENST00000615674 271 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 MIR8058-201ENST00000615737 89 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 AC011155.2-201ENST00000623202 216 ntBASIC3.47□□□□□ -1.85
ZNF48Q96MX3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF48Q96MX3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.46□□□□□ -1.85
ZNF48Q96MX3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
ZNF48Q96MX3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.46□□□□□ -1.85
ZNF48Q96MX3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL353746.1-201ENST00000566293 6881 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RNU1-15P-201ENST00000353977 144 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RNU6-179P-201ENST00000363350 107 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RNA5SP130-201ENST00000364431 114 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 SNORD82-201ENST00000365530 70 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 MIR23B-201ENST00000384832 97 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL139397.2-201ENST00000404529 772 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 Z98941.1-201ENST00000407764 100 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC068533.1-201ENST00000418542 415 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 EZH2P1-201ENST00000431167 291 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 BTF3P15-201ENST00000455606 336 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RPL30P15-201ENST00000457129 321 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC079804.1-201ENST00000461922 436 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RN7SL330P-201ENST00000469709 307 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL132838.2-201ENST00000492041 314 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RNU6-976P-201ENST00000516086 111 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 RNU6-256P-201ENST00000516747 97 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 SNORA31.20-201ENST00000517111 133 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC024619.4-201ENST00000580924 316 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 MIR5690-201ENST00000583739 73 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 MIR3672-201ENST00000584290 82 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC006130.2-201ENST00000586202 326 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AF038458.1-201ENST00000588406 262 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL355812.1-201ENST00000603215 216 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC006254.3-201ENST00000603353 884 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AC104662.1-201ENST00000604448 511 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF48Q96MX3 FAM27D1-201ENST00000612308 341 ntBASIC3.46□□□□□ -1.86
ZNF48Q96MX3 AL442067.1-201ENST00000613261 223 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms