Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 NACAP2-201ENST00000318548 624 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 RNU6-259P-201ENST00000383999 107 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 SNORA70C-201ENST00000384538 135 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AL158156.1-201ENST00000422509 473 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 BRK1P2-201ENST00000442875 223 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 RPL37P4-201ENST00000448908 268 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 HMGB1P29-201ENST00000505659 499 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC108078.1-201ENST00000508073 725 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 RBBP4P6-201ENST00000508098 202 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC022695.1-201ENST00000522089 237 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AGGF1P4-201ENST00000568249 801 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 RPL23AP78-201ENST00000599928 470 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AP001486.3-201ENST00000615334 372 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC112484.5-201ENST00000624189 228 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC099654.7-201ENST00000635788 2127 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 MIR6830-201ENST00000636015 70 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
CMTM3Q96MX0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CMTM3Q96MX0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CMTM3Q96MX0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CMTM3Q96MX0 ELF2P3-201ENST00000445099 1506 ntBASIC3.09□□□□□ -1.92
CMTM3Q96MX0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CMTM3Q96MX0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC092447.7-201ENST00000422212 1621 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RPL32P3-201ENST00000359025 275 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNU6-1120P-201ENST00000362988 108 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 SNORD115-7-201ENST00000365306 82 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNU4-48P-201ENST00000365559 182 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC068538.1-201ENST00000376856 336 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 CISD1P1-201ENST00000393907 327 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 SNORA3.3-201ENST00000408712 125 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 MIR1289-1-201ENST00000408836 144 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNU4-6P-201ENST00000410804 122 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 MTCO3P41-201ENST00000414801 328 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 CALM2P2-201ENST00000428512 440 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC073464.1-201ENST00000429823 534 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC114755.5-201ENST00000447760 831 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 ELOCP23-201ENST00000452014 332 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNU7-182P-201ENST00000459009 62 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RPS27P26-201ENST00000494583 239 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AP002812.1-201ENST00000495378 474 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC093663.1-201ENST00000497190 394 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC098591.2-201ENST00000510152 315 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RAC1P5-201ENST00000512182 576 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RNU6-685P-201ENST00000517088 95 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC022634.1-201ENST00000520765 532 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 OR5AL2P-201ENST00000532185 920 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AL157871.3-201ENST00000557231 293 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 MIR4775-201ENST00000581168 75 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AL445567.2-201ENST00000618935 498 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 AP003355.3-201ENST00000623465 114 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 SEPT14P19-203ENST00000633205 211 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
CMTM3Q96MX0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CMTM3Q96MX0 MTND5P26-201ENST00000426018 1752 ntBASIC3.07□□□□□ -1.92
CMTM3Q96MX0 ZNF285B-201ENST00000561698 1767 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms