Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.28□□□□□ -1.56
CALR3Q96L12 AL512329.2-201ENST00000607350 548 ntBASIC5.28□□□□□ -1.56
CALR3Q96L12 FTX_3.1-201ENST00000610451 147 ntBASIC5.28□□□□□ -1.56
CALR3Q96L12 AL023881.1-201ENST00000621088 301 ntBASIC5.28□□□□□ -1.56
CALR3Q96L12 MIR8062-201ENST00000621515 85 ntBASIC5.28□□□□□ -1.56
CALR3Q96L12 MTND5P7-201ENST00000413558 1798 ntBASIC5.28□□□□□ -1.56
CALR3Q96L12 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CALR3Q96L12 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.28□□□□□ -1.56
CALR3Q96L12 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CALR3Q96L12 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CALR3Q96L12 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CALR3Q96L12 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CALR3Q96L12 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CALR3Q96L12 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.28□□□□□ -1.56
CALR3Q96L12 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.27□□□□□ -1.57
CALR3Q96L12 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 RNU4-50P-201ENST00000364361 141 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 Y_RNA.276-201ENST00000364732 109 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 RNU6-336P-201ENST00000364891 107 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 RPL21P1-201ENST00000399532 476 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 RNA5SP31-201ENST00000411144 127 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.27□□□□□ -1.57
CALR3Q96L12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.27□□□□□ -1.57
CALR3Q96L12 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.27□□□□□ -1.57
CALR3Q96L12 RPS26P2-201ENST00000440331 348 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC079354.2-201ENST00000453523 154 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 RN7SL283P-201ENST00000489055 303 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.27□□□□□ -1.57
CALR3Q96L12 BX510359.5-201ENST00000515651 304 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.27□□□□□ -1.57
CALR3Q96L12 CYCSP39-201ENST00000565821 309 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 MIR3690-201ENST00000580266 75 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC062037.2-201ENST00000610137 73 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 AC022336.2-201ENST00000568966 2538 ntBASIC5.27□□□□□ -1.57
CALR3Q96L12 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.27□□□□□ -1.57
CALR3Q96L12 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CALR3Q96L12 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.26□□□□□ -1.57
CALR3Q96L12 SALL4P2-201ENST00000423288 2910 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CALR3Q96L12 RNU6-874P-201ENST00000362390 105 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CALR3Q96L12 RNU6-784P-201ENST00000384330 106 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 SNORA51.11-201ENST00000384442 131 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 MIR628-201ENST00000385229 95 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 U3.37-201ENST00000408528 213 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 RN7SKP177-201ENST00000410567 355 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 RNU6-847P-201ENST00000411115 108 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.26□□□□□ -1.57
CALR3Q96L12 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.26□□□□□ -1.57
CALR3Q96L12 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.26□□□□□ -1.57
CALR3Q96L12 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.26□□□□□ -1.57
CALR3Q96L12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.26□□□□□ -1.57
CALR3Q96L12 MTATP6P7-201ENST00000453315 681 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 AURKAPS2-201ENST00000454983 333 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 RPS26P39-201ENST00000469206 341 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.26□□□□□ -1.57
CALR3Q96L12 AC097484.1-201ENST00000471148 389 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.26□□□□□ -1.57
CALR3Q96L12 RNY3P15-201ENST00000516297 97 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 RNU6-1183P-201ENST00000517054 60 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.26□□□□□ -1.57
CALR3Q96L12 OR5D17P-201ENST00000531492 978 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 AL590705.4-201ENST00000532209 134 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 MTND4LP5-201ENST00000605152 292 ntBASIC5.26□□□□□ -1.57
CALR3Q96L12 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.26□□□□□ -1.57
CALR3Q96L12 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CALR3Q96L12 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CALR3Q96L12 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CALR3Q96L12 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CALR3Q96L12 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.26□□□□□ -1.57
CALR3Q96L12 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CALR3Q96L12 AC068254.2-201ENST00000623938 3577 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RNA5SP502-201ENST00000362694 119 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RNA5SP132-201ENST00000364725 118 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 MTCYBP2-201ENST00000407745 171 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RNA5SP494-201ENST00000410653 129 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.25□□□□□ -1.57
CALR3Q96L12 PCNPP5-201ENST00000452246 481 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 AC006026.2-201ENST00000457376 180 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RN7SKP210-201ENST00000459176 261 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 AC104109.1-201ENST00000498563 436 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 AC008958.1-201ENST00000511047 682 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms