Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ROCK1P1-201ENST00000573767 549 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 MIR3162-201ENST00000581818 82 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC025811.1-201ENST00000604312 472 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AL022161.1-201ENST00000604390 213 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC009878.1-201ENST00000621819 340 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 AC002064.3-201ENST00000623448 346 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SNRNP40Q96DI7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RNU6-288P-201ENST00000363690 104 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 U3.11-201ENST00000364476 212 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RNU6-55P-201ENST00000411092 107 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RNU6-954P-201ENST00000411355 107 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 MTND2P18-201ENST00000419962 1030 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RPS15AP6-201ENST00000420703 385 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 MTND1P26-201ENST00000440488 538 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 CENPBD1P1-201ENST00000464061 469 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RPS29P20-201ENST00000489592 171 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AC022634.1-201ENST00000520765 532 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AP006587.4-201ENST00000526053 529 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ARL2BPP2-201ENST00000550907 489 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 MIR3118-1-201ENST00000581787 76 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ELOCP29-201ENST00000588193 334 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AC112191.3-201ENST00000604371 277 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL031775.1-201ENST00000607014 887 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 AL359693.1-201ENST00000614959 2407 ntBASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNRNP40Q96DI7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 MIR30E-201ENST00000362104 92 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 MIR22-201ENST00000362190 85 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RNU2-36P-201ENST00000410361 191 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 SEPT2P1-201ENST00000419651 180 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL356583.2-201ENST00000426536 280 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 GTF2IP20-201ENST00000431663 360 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RPS15AP5-201ENST00000436276 388 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 CST9LP2-201ENST00000437612 320 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 COX6CP12-201ENST00000446748 202 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 MTND1P12-201ENST00000455231 147 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 SNRPFP4-201ENST00000456366 242 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC010401.1-201ENST00000463867 348 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC128713.1-201ENST00000471495 306 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RPS29P26-201ENST00000477483 171 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RPS4XP22-201ENST00000480755 780 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RNA5SP367-201ENST00000516557 118 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RNU7-51P-201ENST00000516560 62 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 MIR2276-201ENST00000516886 89 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC022878.1-201ENST00000530684 149 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 NACAP3-201ENST00000552100 481 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RPS3AP4-201ENST00000555161 764 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC010620.2-201ENST00000600135 313 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 CLIC4P2-201ENST00000601934 717 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 BNIP3P9-201ENST00000603714 553 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC104763.2-201ENST00000604179 382 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 AC007619.2-201ENST00000605743 379 ntBASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.8□□□□□ -1.96
SNRNP40Q96DI7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AP002088.1-201ENST00000382740 395 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 Y_RNA.598-201ENST00000410480 95 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms