Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 RNU6-190P-201ENST00000384154 102 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 RNU6-329P-201ENST00000459618 107 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC010285.1-201ENST00000470580 392 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 Y_RNA.654-201ENST00000497848 106 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 HMGB1P22-201ENST00000505315 124 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 MLLT10P2-201ENST00000506434 249 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 TTC39CP1-201ENST00000512513 755 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 GMPSP1-201ENST00000514075 579 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 RNU6-123P-201ENST00000516163 102 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 RN7SKP256-201ENST00000517201 314 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 CBX3P7-201ENST00000532876 502 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC012182.1-201ENST00000570133 895 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC005668.1-201ENST00000571142 476 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC005951.2-201ENST00000576282 495 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 FAM60BP-201ENST00000578364 658 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC053481.4-201ENST00000583164 216 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 MIR4795-201ENST00000584182 89 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC243960.4-201ENST00000600532 288 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AL020997.2-201ENST00000602607 184 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC104763.2-201ENST00000604179 382 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC092807.2-201ENST00000609367 243 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RNU6-14P-201ENST00000384630 106 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 EI24P1-201ENST00000416584 867 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 TOMM22P1-201ENST00000418578 312 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 NCOR1P3-201ENST00000420479 303 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 HSPE1P1-201ENST00000421494 318 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AL133162.1-201ENST00000463228 453 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AC004801.2-202ENST00000463559 283 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 MTCO3P9-201ENST00000506989 781 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 SNORA31.3-201ENST00000516029 96 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RNU6-1038P-201ENST00000516516 104 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RNU6-677P-201ENST00000516914 101 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RN7SKP60-201ENST00000516985 239 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RPL23AP84-201ENST00000571193 464 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AC005498.1-201ENST00000592125 465 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 DPPA3P3-201ENST00000603842 430 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AL359547.2-201ENST00000615810 418 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AL360181.4-201ENST00000621752 134 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 RMST_7.1-201ENST00000621935 268 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 PRO1804-201ENST00000623780 2050 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 AC068647.1-201ENST00000489539 2265 ntBASIC3.72□□□□□ -1.81
ATG4AQ8WYN0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.71□□□□□ -1.81
ATG4AQ8WYN0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ATG4AQ8WYN0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RNU6-82P-201ENST00000363970 107 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 SNORA51.2-201ENST00000364595 132 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RNU6-116P-201ENST00000384042 109 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RNU6-831P-201ENST00000384548 107 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RNU6-817P-201ENST00000391083 104 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 PPIAP31-201ENST00000405422 495 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RPS20P15-201ENST00000412792 311 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 AL158071.1-201ENST00000430315 461 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 RPS24P6-201ENST00000452670 400 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 NUTF2P7-201ENST00000453086 375 ntBASIC3.71□□□□□ -1.82
ATG4AQ8WYN0 ANP32BP2-201ENST00000454525 545 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms