Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 TPRKBP2-201ENST00000565969 475 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 MIR2682-201ENST00000580305 110 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AL136363.1-201ENST00000605349 337 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AP002360.4-201ENST00000606980 481 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AC026585.1-201ENST00000619582 524 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AL359880.1-201ENST00000621879 266 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AC009161.2-201ENST00000624626 138 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 LRRC77P-213ENST00000637727 880 ntBASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC44A1Q8WWI5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC002546.1-201ENST00000588041 2504 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 Y_RNA.1-201ENST00000352915 104 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RNU6-960P-201ENST00000364056 120 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RNU6-39P-201ENST00000384344 107 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 MIR181A1-201ENST00000385026 110 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 ZNF90P2-204ENST00000419323 1075 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 BX842559.1-201ENST00000419615 532 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 MTCO2P19-201ENST00000427513 598 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC008850.1-201ENST00000427546 362 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 MTND1P4-201ENST00000435196 415 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RPL36AP6-201ENST00000435770 321 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL451074.3-201ENST00000437709 472 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 HMGB3P12-201ENST00000438745 556 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC020550.1-201ENST00000447385 163 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 SNRPGP6-201ENST00000451124 220 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RPS23P3-201ENST00000470993 430 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RN7SL432P-201ENST00000484057 298 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL359273.1-201ENST00000510918 627 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AP001893.2-201ENST00000526949 202 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 FAM92A1P1-201ENST00000528023 890 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AP003034.1-201ENST00000534621 422 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 RPL23AP84-201ENST00000571193 464 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 MIR4474-201ENST00000579189 78 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AP001029.3-201ENST00000588063 596 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.6-201ENST00000603753 252 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL391646.1-201ENST00000603860 190 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.11-201ENST00000604059 253 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL162713.1-201ENST00000604480 262 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC008162.1-201ENST00000604718 254 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.1-201ENST00000604752 252 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.5-201ENST00000605253 252 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.12-201ENST00000605291 253 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.8-201ENST00000605353 252 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL670379.7-201ENST00000605823 252 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AP002826.1-201ENST00000608835 315 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL158209.2-201ENST00000619266 216 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC068137.3-201ENST00000639191 341 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AC073869.6-201ENST00000640656 341 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 OR5H6-203ENST00000642105 978 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC44A1Q8WWI5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 Y_RNA.22-201ENST00000362492 102 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 Y_RNA.159-201ENST00000363674 87 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 RNU1-39P-201ENST00000383897 165 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 MIR34B-201ENST00000385076 84 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 RPL17P50-201ENST00000396131 546 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AL591034.1-201ENST00000407447 340 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 SNORA11.1-201ENST00000408133 129 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 FCF1P9-201ENST00000412546 282 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 NDUFB4P7-201ENST00000423198 363 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 ISCA1P1-201ENST00000426679 387 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 FCF1P1-201ENST00000432690 571 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AC002486.1-201ENST00000435098 391 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 SSXP4-201ENST00000451349 245 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 ELOCP23-201ENST00000452014 332 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AC022364.2-201ENST00000457963 554 ntBASIC3.19□□□□□ -1.9
SLC44A1Q8WWI5 AC093899.1-201ENST00000457984 376 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms