Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP000907.2-201ENST00000530827 353 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 AL161713.1-201ENST00000555538 145 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 AL121992.2-201ENST00000606262 256 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 AC104237.2-201ENST00000612456 443 ntBASIC4.26□□□□□ -1.73
SYNE4Q8N205 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SYNE4Q8N205 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNE4Q8N205 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNE4Q8N205 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNE4Q8N205 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SYNE4Q8N205 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL161781.1-201ENST00000354277 403 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 RNU6-1097P-201ENST00000363586 107 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 Y_RNA.234-201ENST00000364409 97 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 Y_RNA.259-201ENST00000364619 101 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 SNORD42.2-201ENST00000365570 69 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 Y_RNA.431-201ENST00000384086 102 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 RNU6-339P-201ENST00000384310 107 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 RNU6-1207P-201ENST00000384343 107 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 SNORD116-29-201ENST00000384516 83 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 MIR548P-201ENST00000408336 84 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 RNU4-14P-201ENST00000410858 122 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 RPL7L1P10-201ENST00000427790 463 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 HMGB1P15-201ENST00000453854 435 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 ANP32BP2-201ENST00000454525 545 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AP1S2P1-201ENST00000457344 379 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC004062.1-201ENST00000509926 645 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 MIR4276-201ENST00000584832 70 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AC004853.1-201ENST00000604902 698 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL158196.1-201ENST00000616786 434 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL596245.1-201ENST00000618994 362 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SYNE4Q8N205 ZNF734P-201ENST00000419494 1534 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 Z83843.1-201ENST00000604070 3685 ntBASIC4.25□□□□□ -1.73
SYNE4Q8N205 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNE4Q8N205 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE4Q8N205 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE4Q8N205 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE4Q8N205 RNVU1-3-201ENST00000364313 161 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 Y_RNA.231-201ENST00000364358 102 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 RNU6-43P-201ENST00000384302 107 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 MIR514A2-201ENST00000385131 88 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 MIR514A3-201ENST00000385132 88 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 RNU6-510P-201ENST00000391239 108 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AL121834.1-202ENST00000404494 277 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 RPL5P18-201ENST00000406671 891 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 RNU6-1304P-201ENST00000411374 106 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE4Q8N205 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 FTH1P1-201ENST00000437933 532 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 AL356010.1-201ENST00000456364 102 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AL163973.1-201ENST00000484753 577 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 FCF1P8-201ENST00000510322 597 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 Y_RNA.665-201ENST00000516177 98 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC005668.1-201ENST00000571142 476 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC104984.5-201ENST00000586878 94 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 GLUD1P4-201ENST00000590914 418 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 RNU6-89P-201ENST00000606519 100 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC093838.1-201ENST00000613014 469 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC040168.1-201ENST00000623594 991 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 AC134503.1-201ENST00000633048 54 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 MIR4496-201ENST00000635896 61 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 MTND4LP32-201ENST00000636111 270 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SYNE4Q8N205 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.24□□□□□ -1.73
SYNE4Q8N205 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms