Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RNU6-432P-201ENST00000384196 109 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 Y_RNA.509-201ENST00000384506 99 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AL109755.1-201ENST00000401791 649 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 SDCBPP3-201ENST00000419629 891 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AP000873.1-201ENST00000463987 400 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 PHBP14-201ENST00000512887 367 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 SNORA70.19-201ENST00000516717 90 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 DEFB108D-201ENST00000527787 222 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 MIR5680-201ENST00000577577 84 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC010525.2-201ENST00000590920 195 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AL136313.1-201ENST00000624804 202 ntBASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
UBE3BQ7Z3V4 TNPO1P3-201ENST00000436471 2662 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 MTCO1P9-201ENST00000505577 1534 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 Y_RNA.142-201ENST00000363491 102 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 SNORA38.1-201ENST00000364172 131 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 MIR3074-201ENST00000384885 81 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 U3.19-201ENST00000390893 196 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AL136372.1-201ENST00000403060 228 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 RNU2-39P-201ENST00000410604 198 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 RNA5SP107-201ENST00000411358 122 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 BEND7P1-201ENST00000422058 457 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 RPL36AP6-201ENST00000435770 321 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 HMGB3P30-201ENST00000457863 606 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC006512.1-201ENST00000468816 291 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC093278.1-201ENST00000494700 600 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 EIF4EP3-201ENST00000498782 656 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC116562.3-201ENST00000506136 177 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 FGF7P4-201ENST00000509595 295 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 APOOP4-201ENST00000513530 597 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 HMGB1P41-201ENST00000520234 440 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC103783.1-201ENST00000520506 373 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC100870.1-201ENST00000522035 505 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC068587.5-201ENST00000528506 175 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 MIR4775-201ENST00000581168 75 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC130324.3-201ENST00000614165 542 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AP001486.3-201ENST00000615334 372 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC004825.2-201ENST00000616634 455 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 MIR6130-201ENST00000619419 109 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 C2orf27A-204ENST00000623058 969 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 AC244517.1-201ENST00000606030 2086 ntBASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
UBE3BQ7Z3V4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 OR4G1P-203ENST00000641984 1631 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 RNU6-263P-201ENST00000363811 107 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 RNU6-193P-201ENST00000410977 107 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 PDCL2P1-201ENST00000419302 352 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 MTCO3P46-201ENST00000425787 232 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 SNRPGP5-201ENST00000456003 220 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 MRPS17P3-201ENST00000465453 385 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 RN7SKP219-201ENST00000516825 296 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 HMGN1P28-201ENST00000521340 364 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 FAM60DP-201ENST00000524174 632 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AP005435.4-201ENST00000529514 284 ntBASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.17□□□□□ -1.74
UBE3BQ7Z3V4 AC012493.2-201ENST00000595083 291 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms