Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 HSPE1P12-201ENST00000412576 301 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 HSPE1P1-201ENST00000421494 318 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC245028.1-201ENST00000423259 256 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AL591212.2-201ENST00000433923 257 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 HMGB3P11-201ENST00000440127 604 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RPS15AP27-201ENST00000449183 343 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 PPP1R2P5-201ENST00000457256 603 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-953P-201ENST00000459154 107 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RPL7P19-201ENST00000469948 618 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.654-201ENST00000497848 106 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RN7SKP13-201ENST00000515933 244 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC093027.1-201ENST00000546698 429 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC011611.1-201ENST00000552179 197 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 MIR4474-201ENST00000579189 78 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 MIR3138-201ENST00000585238 82 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 BNIP3P25-201ENST00000596023 559 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AL353621.2-201ENST00000605340 133 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AC022893.3-201ENST00000607665 437 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 DUSP12P1-201ENST00000612874 516 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 MIR8059-201ENST00000620427 81 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 DEFB108F-201ENST00000344638 222 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.530-201ENST00000384587 101 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 MIR514A1-201ENST00000385133 98 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 HSPA8P1-201ENST00000425843 1833 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 MTND1P14-201ENST00000427400 950 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 DNAJC19P7-201ENST00000428811 344 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 HMGB1P27-201ENST00000431429 603 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 SDAD1P2-201ENST00000441308 2028 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC006026.1-201ENST00000444025 1803 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RPS4XP5-202ENST00000449995 1334 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RPL21P93-201ENST00000480465 489 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC105137.1-201ENST00000484355 562 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RPS23P1-201ENST00000491662 432 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RN7SKP83-201ENST00000516512 178 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AL163153.1-201ENST00000554223 283 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC106782.4-201ENST00000568264 210 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 RN7SL600P-201ENST00000581811 299 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 IPO5P1-202ENST00000600039 287 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AC092747.3-201ENST00000603769 301 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AL355810.1-201ENST00000614629 552 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 AP003400.5-201ENST00000624827 617 ntBASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD4Q6ZW05 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AL139397.2-201ENST00000404529 772 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 POLHP1-201ENST00000411806 470 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AL513331.1-201ENST00000411908 397 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 RPS12P24-201ENST00000412619 387 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 HMGB1P18-201ENST00000438801 619 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC083863.1-201ENST00000438811 231 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 RANP8-201ENST00000444720 713 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD4Q6ZW05 RNU7-66P-201ENST00000459469 62 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms