Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AL161713.1-201ENST00000555538 145 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 LRRC37A5P-203ENST00000580181 585 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC068790.4-201ENST00000602474 263 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL138825.1-201ENST00000618587 192 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 FAM91A3P-201ENST00000456826 2544 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC233263.6-201ENST00000631132 1963 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RNY1P16-201ENST00000363063 111 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RNA5SP22-201ENST00000365393 109 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RNU6-1179P-201ENST00000384667 107 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 Z98745.1-201ENST00000402553 494 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RNU6-325P-201ENST00000411132 105 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 DAP3P1-201ENST00000441522 278 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RPS3AP12-201ENST00000443616 753 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RANP8-201ENST00000444720 713 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RNU6-1132P-201ENST00000459214 107 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 RPS15AP34-201ENST00000487776 387 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC069499.1-201ENST00000489433 509 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 SUMO2P6-201ENST00000505273 288 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC113155.1-201ENST00000511141 769 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 SNORA40.14-201ENST00000516543 86 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC023157.2-201ENST00000540596 141 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC006600.1-201ENST00000572529 153 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AL591516.1-201ENST00000611326 274 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AL512643.1-201ENST00000635735 524 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 AC005183.1-201ENST00000603687 1979 ntBASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF111Q6ZNA4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 RN7SKP115-201ENST00000363177 317 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.324-201ENST00000365165 102 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 RNU6-596P-201ENST00000365395 98 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 MT-TW-201ENST00000387382 68 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AL138885.1-201ENST00000405921 675 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 SUMO1P3-201ENST00000439961 304 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 RPL26P6-201ENST00000440913 438 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 MTCO3P8-201ENST00000453691 755 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 CEACAMP4-201ENST00000457676 421 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 RPS23P1-201ENST00000491662 432 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 ACA59.1-201ENST00000515966 143 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 MIR3976-201ENST00000606807 139 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AL353748.2-201ENST00000622148 471 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 Z99571.1-201ENST00000636677 394 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 AC006971.1-201ENST00000407916 4486 ntBASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF111Q6ZNA4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms