Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TPTE2P4-201ENST00000258589 1605 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-874P-201ENST00000362390 105 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU1-115P-201ENST00000365329 160 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RHOT1P2-201ENST00000366423 333 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-472P-201ENST00000384299 107 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.552-201ENST00000384665 112 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-278P-201ENST00000390945 109 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-550P-201ENST00000391057 101 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 SNORD66.1-201ENST00000391230 76 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU4-46P-201ENST00000410818 138 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RAB9AP3-201ENST00000412737 573 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 BX682237.1-201ENST00000415016 335 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 HMGB1P9-201ENST00000429856 646 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC236972.1-201ENST00000433225 199 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RAB9AP1-201ENST00000449393 573 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 SNORD121B-201ENST00000458838 81 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC108022.1-201ENST00000493466 478 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 HMGB3P17-201ENST00000504195 649 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC021146.3-201ENST00000511911 260 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNY3P15-201ENST00000516297 97 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-406P-201ENST00000516470 107 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AP003385.6-201ENST00000531603 374 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC092447.9-201ENST00000603395 144 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
CNKSR3Q6P9H4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 MAPK10-303ENST00000641324 3959 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 HMGN1P24-201ENST00000412282 298 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AL356968.1-201ENST00000416622 474 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC006011.1-201ENST00000442758 349 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 PRSS3P4-201ENST00000453323 162 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 RNU7-59P-201ENST00000459101 61 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC104472.2-201ENST00000469035 601 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 VN1R104P-201ENST00000505115 1009 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 TBCAP3-201ENST00000512475 312 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 IGKV2-23-201ENST00000518729 323 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC023157.2-201ENST00000540596 141 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AL133153.1-201ENST00000557756 303 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 MIR5692C1-201ENST00000585309 91 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 SNORD58B-201ENST00000607313 66 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 LINC00901.1-201ENST00000617252 152 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 MIR8062-201ENST00000621515 85 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 AC055839.1-201ENST00000634467 498 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNKSR3Q6P9H4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNA5SP119-201ENST00000362715 117 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 SNORA73.2-201ENST00000364946 201 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RNU2-15P-201ENST00000410692 191 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 CTSL3P-202ENST00000412179 788 ntBASIC4.47□□□□□ -1.69
CNKSR3Q6P9H4 RPL30P2-201ENST00000414021 291 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms