Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 AC025594.3-201ENST00000613068 790 ntBASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 AC009159.1-201ENST00000618386 642 ntBASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 CU459211.1-201ENST00000635667 749 ntBASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 Z82209.1-201ENST00000422141 2135 ntBASIC2.2□□□□□ -2.06
H3F3CQ6NXT2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 RPS3AP37-201ENST00000419176 745 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MTND5P14-201ENST00000441481 1267 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC007327.1-201ENST00000447461 264 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MTND1P31-201ENST00000449206 961 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 ZNF886P-201ENST00000450781 723 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MEMO1P3-201ENST00000459811 302 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MRPL42P6-201ENST00000486397 371 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC116353.3-201ENST00000511215 249 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AF038458.1-201ENST00000588406 262 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC005014.3-201ENST00000605985 190 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AP002791.1-201ENST00000623291 381 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC010608.3-201ENST00000625048 527 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 AC006020.1-201ENST00000420179 1854 ntBASIC2.19□□□□□ -2.06
H3F3CQ6NXT2 MTND4P9-201ENST00000507819 1346 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC010889.1-201ENST00000566193 2666 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL139276.1-201ENST00000311910 1001 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 Y_RNA.192-201ENST00000363977 102 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 RNU6-432P-201ENST00000384196 109 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MIR218-1-201ENST00000384999 110 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MIR1284-201ENST00000408337 120 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC007560.1-201ENST00000426912 237 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL358794.1-201ENST00000445689 381 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 EEF1E1P1-201ENST00000446998 430 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 FCF1P6-201ENST00000456841 595 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL121769.1-201ENST00000469473 401 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC135721.1-201ENST00000497954 479 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC107222.1-201ENST00000510899 637 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 DEFB131D-201ENST00000526803 184 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AP003497.1-201ENST00000528472 562 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL359212.1-201ENST00000556608 614 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 CYCSP2-201ENST00000558168 301 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AGGF1P5-201ENST00000567900 919 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 MYL12BP1-201ENST00000569826 507 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 TMF1P1-201ENST00000576058 373 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL353997.4-201ENST00000586196 166 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AC239868.4-201ENST00000608318 671 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 AL445984.1-201ENST00000637834 659 ntBASIC2.18□□□□□ -2.06
H3F3CQ6NXT2 RNU6-560P-201ENST00000364007 108 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 RNU6-777P-201ENST00000364265 104 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 RNU6-1242P-201ENST00000391052 103 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 RNU6-754P-201ENST00000391166 107 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AL162578.1-201ENST00000406202 378 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 RNU4-72P-201ENST00000410754 173 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 USP9YP33-201ENST00000412220 421 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AF274854.1-201ENST00000413236 615 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 BTF3L4P3-201ENST00000418879 476 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AL354692.1-201ENST00000423044 315 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AC098826.1-201ENST00000433943 471 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 RPS25P9-201ENST00000435591 252 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 USP9YP35-201ENST00000435696 412 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 MTCO2P25-201ENST00000447065 681 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 snoU109.3-201ENST00000459477 145 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 AC104563.1-201ENST00000476147 376 ntBASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.17□□□□□ -2.06
H3F3CQ6NXT2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms