Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNA5SP401-201ENST00000515920 127 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 RNA5SP49-201ENST00000516450 115 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-703P-201ENST00000516946 107 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 SUB1P1-201ENST00000524415 382 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 RANP3-201ENST00000530970 276 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AL138976.2-201ENST00000563989 694 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AC136624.4-201ENST00000573044 370 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 MIR3138-201ENST00000585238 82 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 MIR4424-201ENST00000585257 86 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AL162413.1-201ENST00000603198 110 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 MIR6716-201ENST00000613413 80 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 AC004852.3-201ENST00000614131 326 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 U6.114-201ENST00000636407 96 ntBASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
PPP4R4Q6NUP7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
PPP4R4Q6NUP7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.84□□□□□ -1.8
PPP4R4Q6NUP7 ZNF285B-201ENST00000561698 1767 ntBASIC3.84□□□□□ -1.8
PPP4R4Q6NUP7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PPP4R4Q6NUP7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RNY3P3-201ENST00000363816 102 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC068538.1-201ENST00000376856 336 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RNU1-73P-201ENST00000383971 164 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RPS26P8-201ENST00000393490 348 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL136116.1-201ENST00000403591 381 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL356967.1-201ENST00000406305 431 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RNU2-29P-201ENST00000410423 189 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RPL26P27-201ENST00000414397 437 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 HMGN2P30-201ENST00000423237 256 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 COX6B1P7-201ENST00000430845 235 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC104058.1-201ENST00000448028 297 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 RPS15AP34-201ENST00000487776 387 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC114786.4-201ENST00000508771 728 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC008958.1-201ENST00000511047 682 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 CYCSP29-201ENST00000533731 318 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 HMGN2P15-201ENST00000585707 270 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC008945.2-201ENST00000606056 604 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AC024940.5-201ENST00000622889 474 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 AL512643.1-201ENST00000635735 524 ntBASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PPP4R4Q6NUP7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RNU1-14P-201ENST00000362759 152 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RNA5SP366-201ENST00000365454 123 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RNU4-20P-201ENST00000365601 151 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MIR1277-201ENST00000408536 78 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MYL8P-204ENST00000431574 518 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 DPPA3P1-201ENST00000448050 469 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RPL26P9-201ENST00000457466 433 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RPS29P20-201ENST00000489592 171 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AC139453.3-201ENST00000493276 369 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 AC009902.1-201ENST00000519351 183 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 MTND1P35-201ENST00000526739 508 ntBASIC3.82□□□□□ -1.8
PPP4R4Q6NUP7 TRAV8-5-201ENST00000537369 341 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms