Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 HPRT1P3-201ENST00000539521 576 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC093027.1-201ENST00000546698 429 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC011471.1-201ENST00000585766 187 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC007619.2-201ENST00000605743 379 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL355810.1-201ENST00000614629 552 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL713922.2-201ENST00000619384 716 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC005858.4-201ENST00000623191 700 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 FRG1KP-201ENST00000623592 341 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 OR4G2P-202ENST00000641004 1759 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC073343.1-201ENST00000328239 651 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 RNU4-48P-201ENST00000365559 182 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 MIR454-201ENST00000390180 115 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 Z92545.1-201ENST00000411782 234 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 MTCYBP8-201ENST00000422855 651 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 TAAR7P-201ENST00000436141 242 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 SEPT14P3-201ENST00000439401 183 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL732372.2-207ENST00000445840 183 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 SEPT14P2-201ENST00000453405 183 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL162395.1-201ENST00000457882 422 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC078785.3-201ENST00000476607 425 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 RN7SL432P-201ENST00000484057 298 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 SEPT14P4-201ENST00000513445 186 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 FO082796.1-201ENST00000523795 183 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC055876.1-202ENST00000567053 138 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AC018638.8-201ENST00000588755 281 ntBASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A4Q53GD3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.72-201ENST00000362894 103 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNU6-960P-201ENST00000364056 120 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNY3P1-201ENST00000365085 102 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNY3-201ENST00000365484 102 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNU6-606P-201ENST00000384721 111 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 MIR634-201ENST00000385208 97 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RANP8-201ENST00000444720 713 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC092451.1-201ENST00000480211 153 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC005921.1-201ENST00000510589 286 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AP006587.4-201ENST00000526053 529 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms