Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNORD39.4-201ENST00000620099 78 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 AC110801.1-201ENST00000623590 212 ntBASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.73□□□□□ -1.65
RSPO4Q2I0M5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 ADAM24P-201ENST00000398655 2101 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 SNORA71.3-201ENST00000362582 128 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNU6-312P-201ENST00000364629 107 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 Y_RNA.262-201ENST00000364641 102 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RN7SKP153-201ENST00000365026 316 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 Y_RNA.357-201ENST00000365487 109 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNU6-1226P-201ENST00000384317 107 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNU6-429P-201ENST00000384582 108 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNU6-225P-201ENST00000384613 103 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 MIR521-1-201ENST00000384902 87 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNA5SP317-201ENST00000410176 116 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNA5SP311-201ENST00000411290 116 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RPL21P90-201ENST00000415692 466 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RPS23P10-201ENST00000416185 486 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 CYCSP10-201ENST00000417973 294 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RN7SL197P-201ENST00000466981 299 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RPS4XP22-201ENST00000480755 780 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AC105137.1-201ENST00000484355 562 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AC091959.1-201ENST00000495857 238 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNA5SP315-201ENST00000516340 116 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 RNA5SP312-201ENST00000517068 116 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AC010632.3-201ENST00000611377 369 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AP005019.3-201ENST00000620418 560 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AL023881.1-201ENST00000621088 301 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 Z95114.1-201ENST00000624264 14574 ntBASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RSPO4Q2I0M5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RSPO4Q2I0M5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RSPO4Q2I0M5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
RSPO4Q2I0M5 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RSPO4Q2I0M5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC097461.1-201ENST00000568928 2821 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RNU6-755P-201ENST00000364400 103 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 SNORA2.3-201ENST00000383920 135 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 Y_RNA.571-201ENST00000384753 98 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 HSPE1P8-201ENST00000406997 288 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AL357139.1-201ENST00000407792 426 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 MIR1302-4-201ENST00000408701 150 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 PPIAP13-201ENST00000434706 478 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RN7SKP210-201ENST00000459176 261 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RNU6-1037P-201ENST00000459571 107 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC026726.1-201ENST00000512859 601 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC098976.1-201ENST00000513014 541 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC104057.1-201ENST00000515547 497 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 SNORA27.4-201ENST00000516650 95 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 MIR5692A1-201ENST00000580523 69 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AL591034.3-201ENST00000605511 685 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC004656.1-201ENST00000568479 4951 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms