Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSRP1Q08945 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.52□□□□□ -1.69
SSRP1Q08945 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSRP1Q08945 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.52□□□□□ -1.69
SSRP1Q08945 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SSRP1Q08945 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.51□□□□□ -1.69
SSRP1Q08945 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSRP1Q08945 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
SSRP1Q08945 AC018555.1-201ENST00000567548 1980 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSRP1Q08945 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSRP1Q08945 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSRP1Q08945 RNU6-1167P-201ENST00000363227 94 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 Y_RNA.301-201ENST00000364990 103 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 RNA5SP97-201ENST00000365006 84 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AL451062.2-201ENST00000427515 271 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 VDAC1P3-201ENST00000434069 851 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 HSPD1P21-201ENST00000436541 245 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.51□□□□□ -1.69
SSRP1Q08945 NUTF2P7-201ENST00000453086 375 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.51□□□□□ -1.69
SSRP1Q08945 MTCO1P29-201ENST00000496868 288 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.51□□□□□ -1.69
SSRP1Q08945 RN7SKP21-201ENST00000516503 220 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 RNA5SP471-201ENST00000516971 106 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.51□□□□□ -1.69
SSRP1Q08945 AP000889.2-201ENST00000532684 490 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.51□□□□□ -1.69
SSRP1Q08945 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.51□□□□□ -1.69
SSRP1Q08945 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.51□□□□□ -1.69
SSRP1Q08945 AL606490.9-201ENST00000603331 271 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AC098826.3-201ENST00000603823 466 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AC103858.2-201ENST00000621471 543 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AC068724.3-201ENST00000625906 87 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 AL133216.2-202ENST00000634512 349 ntBASIC4.51□□□□□ -1.69
SSRP1Q08945 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.51□□□□□ -1.69
SSRP1Q08945 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSRP1Q08945 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC116096.1-201ENST00000566804 2314 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 Y_RNA.460-201ENST00000384255 102 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 MIR1193-201ENST00000408109 78 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 Z85995.1-201ENST00000415547 335 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 RPLP0P7-201ENST00000416050 667 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 AL592045.1-201ENST00000429867 352 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AL356535.1-201ENST00000440335 398 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 RPL21P41-201ENST00000459863 264 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 RPS15AP34-201ENST00000487776 387 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AP002812.1-201ENST00000495378 474 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSRP1Q08945 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 ATP5F1P5-201ENST00000526403 760 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AP004242.1-201ENST00000533701 349 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC135001.1-201ENST00000544546 283 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AC004024.1-201ENST00000549244 247 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC074050.1-201ENST00000563247 211 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 MIR3942-201ENST00000585264 109 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 ATP1B3P1-201ENST00000605365 821 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 uc_338.15-201ENST00000615470 191 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 AC090132.2-201ENST00000615881 347 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AC022418.1-201ENST00000624118 445 ntBASIC4.5□□□□□ -1.69
SSRP1Q08945 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.5□□□□□ -1.69
SSRP1Q08945 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSRP1Q08945 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.5□□□□□ -1.69
SSRP1Q08945 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.5□□□□□ -1.69
SSRP1Q08945 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SSRP1Q08945 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
SSRP1Q08945 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.49□□□□□ -1.69
SSRP1Q08945 Y_RNA.126-201ENST00000363382 111 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 RNU6-512P-201ENST00000364438 103 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 Y_RNA.474-201ENST00000384341 102 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 RNU6-45P-201ENST00000384471 107 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 RNU6-1011P-201ENST00000384668 107 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSRP1Q08945 AL590383.1-201ENST00000428602 75 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SSRP1Q08945 AC233279.1-201ENST00000455300 423 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
SSRP1Q08945 RNU6-143P-201ENST00000516942 93 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms