Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-744P-201ENST00000365557 107 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU6-1074P-201ENST00000383995 104 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU6-1316P-201ENST00000384242 108 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 SNORD51-201ENST00000384320 80 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 U8.14-201ENST00000390843 143 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL139039.1-201ENST00000401900 692 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU2-15P-201ENST00000410692 191 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 MTCO1P17-201ENST00000411522 491 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 RPS24P1-201ENST00000438550 371 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 USP9YP29-201ENST00000445112 563 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL359385.1-201ENST00000456509 365 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU6-956P-201ENST00000458868 103 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 snoU109.4-201ENST00000458953 143 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 FAM133DP-201ENST00000464802 691 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AC079140.3-201ENST00000511111 550 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AC010625.1-201ENST00000511296 403 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.49□□□□□ -2.01
CKAP4Q07065 RNU6-27P-201ENST00000516146 107 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 SNORA67.7-201ENST00000516664 135 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CKAP4Q07065 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AP000889.2-201ENST00000532684 490 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 EEF1B2P4-201ENST00000551398 348 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC006362.1-201ENST00000567392 174 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.49□□□□□ -2.01
CKAP4Q07065 MIR5697-201ENST00000578045 78 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AC008739.2-201ENST00000597006 317 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AC146944.4-201ENST00000602697 718 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL137843.1-201ENST00000605078 385 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL451064.1-201ENST00000607718 471 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AC093732.2-201ENST00000607950 274 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 HULC.1-201ENST00000612720 240 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.49□□□□□ -2.01
CKAP4Q07065 AL603839.4-201ENST00000624658 1005 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 AC091925.2-201ENST00000625059 256 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CKAP4Q07065 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CKAP4Q07065 AL049780.3-201ENST00000624612 1583 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 MTND5P1-201ENST00000445440 1375 ntBASIC2.49□□□□□ -2.01
CKAP4Q07065 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 CKAP2P1-201ENST00000555477 2049 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 RNY4P24-201ENST00000362735 96 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 RNU5E-5P-201ENST00000365379 116 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 RNU6-359P-201ENST00000365466 108 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CKAP4Q07065 SNORA75-201ENST00000384158 137 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 MTCYBP36-201ENST00000404146 440 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.48□□□□□ -2.01
CKAP4Q07065 CDK8P2-201ENST00000415020 547 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 MTCO2P34-201ENST00000421994 607 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC091390.3-201ENST00000426478 338 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.48□□□□□ -2.01
CKAP4Q07065 AL353691.1-201ENST00000451332 387 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 SNRPFP4-201ENST00000456366 242 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.48□□□□□ -2.01
CKAP4Q07065 AC104435.1-201ENST00000483483 166 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.48□□□□□ -2.01
CKAP4Q07065 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.48□□□□□ -2.01
CKAP4Q07065 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 RN7SKP24-201ENST00000515888 284 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 RNU6-1003P-201ENST00000517099 105 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 AC024224.1-201ENST00000538284 609 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.48□□□□□ -2.01
CKAP4Q07065 AC090615.1-201ENST00000577519 154 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 MIR548AB-201ENST00000584917 84 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.48□□□□□ -2.01
CKAP4Q07065 AL109618.2-201ENST00000605527 211 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AL161734.1-201ENST00000609720 557 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC138749.5-201ENST00000611461 208 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC006329.2-201ENST00000611491 394 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC027807.2-201ENST00000616099 408 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC116165.2-201ENST00000616705 206 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.48□□□□□ -2.01
CKAP4Q07065 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 AC093591.3-201ENST00000634516 308 ntBASIC2.48□□□□□ -2.01
CKAP4Q07065 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKAP4Q07065 CCT4P2-201ENST00000233836 1548 ntBASIC2.47□□□□□ -2.01
CKAP4Q07065 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CKAP4Q07065 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms