Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 COX6CP2-201ENST00000444980 225 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 GDI2P2-201ENST00000445131 608 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 ELOCP30-201ENST00000447108 299 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 ST13P20-201ENST00000447996 1065 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC133134.1-201ENST00000466800 359 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RPL9P33-201ENST00000484311 566 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RPL36AP51-201ENST00000487216 318 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RPL30P5-201ENST00000494923 336 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 ARL4AP2-201ENST00000507378 601 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC008413.1-201ENST00000511864 177 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.9□□□□□ -1.95
GABPAQ06546 RNU6-759P-201ENST00000516740 103 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.9□□□□□ -1.95
GABPAQ06546 DUXAP5-201ENST00000529668 529 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.9□□□□□ -1.95
GABPAQ06546 AL157394.1-201ENST00000562983 1224 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 MIR5092-201ENST00000583139 88 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AL355472.4-201ENST00000610233 626 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC013476.2-201ENST00000614456 459 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 SDR42E1P2-201ENST00000614861 481 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.95
GABPAQ06546 AC079248.2-201ENST00000623779 326 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 AC093591.3-201ENST00000634516 308 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
GABPAQ06546 TPTE2P4-201ENST00000258589 1605 ntBASIC2.9□□□□□ -1.95
GABPAQ06546 RNU4-72P-201ENST00000410754 173 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RNU6-920P-201ENST00000410926 92 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RPL21P24-201ENST00000413752 448 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AC006020.1-201ENST00000420179 1854 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC109583.1-201ENST00000432156 268 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RPL7P34-201ENST00000433316 712 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RPL22P17-201ENST00000438729 315 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.89□□□□□ -1.95
GABPAQ06546 AL031183.1-201ENST00000457667 207 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.89□□□□□ -1.95
GABPAQ06546 RNU7-59P-201ENST00000459101 61 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AC008481.1-201ENST00000463278 396 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
GABPAQ06546 RPL23AP45-201ENST00000476406 468 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.89□□□□□ -1.95
GABPAQ06546 RN7SL636P-201ENST00000497504 294 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC234781.5-201ENST00000508429 271 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RNA5SP24-201ENST00000516478 95 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AC026407.1-201ENST00000518369 204 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.89□□□□□ -1.95
GABPAQ06546 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.89□□□□□ -1.95
GABPAQ06546 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
GABPAQ06546 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.89□□□□□ -1.95
GABPAQ06546 MIR3609-201ENST00000582661 80 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 AP001981.2-201ENST00000603241 418 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC064859.1-201ENST00000624741 174 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
GABPAQ06546 AC069528.2-201ENST00000624849 1991 ntBASIC2.89□□□□□ -1.95
GABPAQ06546 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GABPAQ06546 Y_RNA.46-201ENST00000362695 102 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 RPS20P2-201ENST00000402520 389 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 SPA17P1-201ENST00000416656 452 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 OOSP1P1-201ENST00000423265 274 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 MTCO3P45-201ENST00000443036 613 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.88□□□□□ -1.95
GABPAQ06546 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.88□□□□□ -1.95
GABPAQ06546 AC010631.1-201ENST00000474150 156 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 RPL30P6-201ENST00000475925 342 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 RPL23AP41-201ENST00000484754 458 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AC010486.2-201ENST00000505572 483 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
GABPAQ06546 AC005178.1-201ENST00000508392 440 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
GABPAQ06546 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.88□□□□□ -1.95
GABPAQ06546 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.88□□□□□ -1.95
GABPAQ06546 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
GABPAQ06546 ACTR3BP3-201ENST00000565577 979 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AC091489.2-201ENST00000566263 604 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.88□□□□□ -1.95
GABPAQ06546 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
GABPAQ06546 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.88□□□□□ -1.95
GABPAQ06546 AC116312.1-201ENST00000606841 314 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AC090970.3-201ENST00000612566 866 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AF246928.1-201ENST00000623768 87 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 AC097655.1-201ENST00000635075 318 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms