Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ZNF702P-202ENST00000434269 1966 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 MTCO1P9-201ENST00000505577 1534 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AL354685.2-201ENST00000448218 1447 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AL356292.1-201ENST00000283110 373 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
H3F3AP84243 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
H3F3AP84243 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
H3F3AP84243 AL512604.1-201ENST00000404812 257 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 AL590233.1-201ENST00000430017 456 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.61□□□□□ -2.15
H3F3AP84243 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.61□□□□□ -2.15
H3F3AP84243 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AC010095.1-201ENST00000443543 144 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 MTCO1P42-201ENST00000457379 726 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.61□□□□□ -2.15
H3F3AP84243 HMGB1P36-201ENST00000487709 576 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.61□□□□□ -2.15
H3F3AP84243 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.61□□□□□ -2.15
H3F3AP84243 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.61□□□□□ -2.15
H3F3AP84243 RN7SKP31-201ENST00000516354 278 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
H3F3AP84243 AC067805.1-201ENST00000559344 470 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AL049838.1-201ENST00000563647 981 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AC007151.1-201ENST00000572774 483 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.61□□□□□ -2.15
H3F3AP84243 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.61□□□□□ -2.15
H3F3AP84243 AC068790.3-201ENST00000602988 553 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AL450270.1-201ENST00000606160 391 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 AC007349.4-201ENST00000608114 532 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.61□□□□□ -2.15
H3F3AP84243 AC109809.1-201ENST00000619665 545 ntBASIC1.61□□□□□ -2.15
H3F3AP84243 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
H3F3AP84243 MIR583-201ENST00000384846 75 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 SNORA40.18-201ENST00000391200 128 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 RNU2-33P-201ENST00000410344 192 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 SFR1P2-201ENST00000421841 730 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AIMP1P2-201ENST00000425294 312 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 RPS3AP44-201ENST00000425466 790 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.6□□□□□ -2.15
H3F3AP84243 USP9YP15-201ENST00000442391 422 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.6□□□□□ -2.15
H3F3AP84243 GTF2IP12-201ENST00000456547 356 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC025181.1-201ENST00000477507 416 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.6□□□□□ -2.15
H3F3AP84243 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
H3F3AP84243 YWHAEP4-201ENST00000505390 198 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC093281.2-201ENST00000510153 597 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC006499.2-201ENST00000513470 337 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.6□□□□□ -2.15
H3F3AP84243 MIR3126-201ENST00000577443 74 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 MIR4255-201ENST00000579351 72 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC024619.4-201ENST00000580924 316 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.6□□□□□ -2.15
H3F3AP84243 MIR4765-201ENST00000585007 77 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AP000238.1-201ENST00000608759 426 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC093673.2-201ENST00000609674 331 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 MIR6845-201ENST00000613182 61 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AC104763.3-201ENST00000613765 618 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 MTND5P30-201ENST00000452896 1731 ntBASIC1.6□□□□□ -2.15
H3F3AP84243 AL356473.1-201ENST00000406203 1408 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
H3F3AP84243 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
H3F3AP84243 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.59□□□□□ -2.15
H3F3AP84243 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
H3F3AP84243 U8.14-201ENST00000390843 143 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 SNORA26.9-201ENST00000391322 122 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
H3F3AP84243 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 BPY2DP-201ENST00000422208 265 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AL121882.1-201ENST00000422893 417 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.59□□□□□ -2.15
H3F3AP84243 AL353689.1-201ENST00000438895 199 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AC092393.1-201ENST00000439625 742 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AC007677.1-201ENST00000445757 515 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AC002381.1-201ENST00000447049 280 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
H3F3AP84243 RPL21P99-201ENST00000480369 423 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 RPL21P47-201ENST00000483696 477 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 RPL23AP41-201ENST00000484754 458 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
H3F3AP84243 AC091860.1-201ENST00000505723 432 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.59□□□□□ -2.15
H3F3AP84243 AF213884.2-201ENST00000510417 903 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 LTV1P1-201ENST00000510683 1237 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 RNU6-840P-201ENST00000517275 65 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 EEF1A1P37-201ENST00000522748 715 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
H3F3AP84243 AL359212.1-201ENST00000556608 614 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 MIR4419B-201ENST00000577260 68 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.59□□□□□ -2.15
H3F3AP84243 AL158827.2-201ENST00000602494 330 ntBASIC1.59□□□□□ -2.15
H3F3AP84243 AC136601.2-201ENST00000604356 474 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms