Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC074029.2-201ENST00000551045 634 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 MIR4287-201ENST00000579398 78 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AC135178.6-201ENST00000605314 398 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 uc_338.9-201ENST00000617424 182 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
PRKDCP78527 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL356057.2-201ENST00000403318 432 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 HNRNPDP2-201ENST00000406475 478 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.67□□□□□ -2.3
PRKDCP78527 RPL27AP8-201ENST00000424277 446 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.67□□□□□ -2.3
PRKDCP78527 AC009901.1-201ENST00000506703 541 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AC025768.1-201ENST00000510057 267 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AC023824.2-201ENST00000566185 400 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.67□□□□□ -2.3
PRKDCP78527 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.67□□□□□ -2.3
PRKDCP78527 AC068831.7-201ENST00000616954 363 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL442644.1-201ENST00000454390 3105 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 AL589743.1-201ENST00000551932 2712 ntBASIC0.67□□□□□ -2.3
PRKDCP78527 SNRPEP3-201ENST00000338402 276 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 Y_RNA.412-201ENST00000384001 104 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 SSXP10-201ENST00000402595 565 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.66□□□□□ -2.3
PRKDCP78527 RNU2-44P-201ENST00000516795 194 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC034236.3-201ENST00000605999 461 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 MIR6840-201ENST00000611937 71 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC087588.2-201ENST00000617667 426 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.66□□□□□ -2.3
PRKDCP78527 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
PRKDCP78527 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
PRKDCP78527 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.66□□□□□ -2.3
PRKDCP78527 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.66□□□□□ -2.3
PRKDCP78527 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.66□□□□□ -2.3
PRKDCP78527 RNU1-72P-201ENST00000362976 153 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 SNORA38-201ENST00000363946 132 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.66□□□□□ -2.3
PRKDCP78527 MTATP6P22-201ENST00000507369 598 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC091965.2-201ENST00000512324 613 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC008676.3-201ENST00000521237 435 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 MIR4496-201ENST00000635896 61 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
PRKDCP78527 AC096656.1-201ENST00000623826 1364 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 RNU6-666P-201ENST00000363499 107 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 RPL37P6-202ENST00000464216 403 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.66□□□□□ -2.3
PRKDCP78527 CYCSP26-201ENST00000534107 320 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.66□□□□□ -2.3
PRKDCP78527 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.66□□□□□ -2.3
PRKDCP78527 DPRXP5-201ENST00000604662 539 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 AC024595.1-201ENST00000623088 387 ntBASIC0.66□□□□□ -2.3
PRKDCP78527 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.65□□□□□ -2.31
PRKDCP78527 AL034374.1-201ENST00000406329 351 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.65□□□□□ -2.31
PRKDCP78527 RPL23AP33-201ENST00000442301 452 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.65□□□□□ -2.31
PRKDCP78527 AC008739.2-201ENST00000597006 317 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC004241.3-201ENST00000611728 517 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC006249.1-201ENST00000621223 471 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 CD24P4-201ENST00000382840 243 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 RNA5SP492-201ENST00000411330 114 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.65□□□□□ -2.31
PRKDCP78527 LINC00933-203ENST00000559812 219 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 HMGB1P24-202ENST00000615653 685 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC118469.1-201ENST00000442943 488 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.65□□□□□ -2.31
PRKDCP78527 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.65□□□□□ -2.31
PRKDCP78527 AC010285.1-201ENST00000470580 392 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 AC114322.1-201ENST00000506771 926 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.65□□□□□ -2.31
PRKDCP78527 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.65□□□□□ -2.31
PRKDCP78527 AC069304.3-201ENST00000603938 1084 ntBASIC0.65□□□□□ -2.31
PRKDCP78527 CCT4P2-201ENST00000233836 1548 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 SNORA46.1-201ENST00000391069 153 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AC233728.2-201ENST00000425348 757 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.64□□□□□ -2.31
PRKDCP78527 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.64□□□□□ -2.31
PRKDCP78527 RNU1-62P-201ENST00000362599 164 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 RNU6-837P-201ENST00000391056 108 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.64□□□□□ -2.31
PRKDCP78527 AC087272.1-201ENST00000523624 533 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 MIR4723-201ENST00000585070 81 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AC005034.5-201ENST00000604219 466 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.64□□□□□ -2.31
PRKDCP78527 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.64□□□□□ -2.31
PRKDCP78527 AL360221.1-201ENST00000445989 335 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AC234775.1-201ENST00000454247 670 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 HMGB1P46-201ENST00000520062 610 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.64□□□□□ -2.31
PRKDCP78527 FAM106CP-201ENST00000582212 507 ntBASIC0.64□□□□□ -2.31
PRKDCP78527 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms