Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ADI1P3-201ENST00000549509 470 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.86□□□□□ -1.95
CX3CL1P78423 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CL1P78423 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.86□□□□□ -1.95
CX3CL1P78423 AC004805.2-201ENST00000605382 482 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AP001330.5-201ENST00000607176 411 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 MIR15A-201ENST00000607334 83 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AL121772.2-201ENST00000614331 297 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AP001486.3-201ENST00000615334 372 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AL359547.2-201ENST00000615810 418 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AC011155.2-201ENST00000623202 216 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.86□□□□□ -1.95
CX3CL1P78423 SEPT14P19-203ENST00000633205 211 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 Z99571.1-201ENST00000636677 394 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 AC119674.1-207ENST00000641355 633 ntBASIC2.86□□□□□ -1.95
CX3CL1P78423 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CX3CL1P78423 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.86□□□□□ -1.95
CX3CL1P78423 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CX3CL1P78423 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CL1P78423 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CL1P78423 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CL1P78423 Y_RNA.372-201ENST00000365599 102 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AL359837.1-201ENST00000381357 287 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNU6-1029P-201ENST00000384109 107 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 MIR554-201ENST00000384874 96 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CX3CL1P78423 RNA5SP252-201ENST00000391131 119 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNU6-1158P-201ENST00000391167 107 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 CISD1P1-201ENST00000393907 327 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AL591416.1-201ENST00000404015 867 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 Y_RNA.599-201ENST00000410489 109 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 Y_RNA.619-201ENST00000410951 90 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNU6-387P-201ENST00000411331 105 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 ATP5A1P2-201ENST00000412323 255 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC092017.2-201ENST00000427600 362 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 RPL36AP53-201ENST00000432891 316 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 SNRPEP9-201ENST00000436794 238 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 FDX1P2-201ENST00000450769 375 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC027673.1-201ENST00000456245 405 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AL356010.1-201ENST00000456364 102 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNU7-63P-201ENST00000459054 62 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 FCF1P3-201ENST00000496394 590 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AC009646.1-201ENST00000510455 318 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 SNORA31.1-201ENST00000515993 133 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 SNORA31.5-201ENST00000516190 133 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNU6-579P-201ENST00000516879 102 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNA5SP503-201ENST00000517047 117 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 RNA5SP165-201ENST00000517142 115 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CL1P78423 AC008752.3-201ENST00000588113 712 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 BNIP3P9-201ENST00000603714 553 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 FTX_3.1-201ENST00000610451 147 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AL138880.2-201ENST00000616214 239 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 AC073308.1-201ENST00000623696 305 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.85□□□□□ -1.95
CX3CL1P78423 AL512643.1-201ENST00000635735 524 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 U6.114-201ENST00000636407 96 ntBASIC2.85□□□□□ -1.95
CX3CL1P78423 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.85□□□□□ -1.95
CX3CL1P78423 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CX3CL1P78423 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC091152.2-201ENST00000591628 2569 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC007823.1-201ENST00000569932 1566 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC027514.1-201ENST00000588561 1603 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 Y_RNA.6-201ENST00000362350 114 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 SNORD9-201ENST00000362566 104 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU6-1085P-201ENST00000363576 107 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNA5SP42-201ENST00000364278 115 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU6-805P-201ENST00000365643 106 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AP002088.1-201ENST00000382740 395 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 MIR591-201ENST00000385290 95 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CX3CL1P78423 U3.39-201ENST00000408569 239 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms