Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 POLR2J4-204ENST00000418424 324 ntBASIC0.28□□□□□ -2.36
RPL39P62891 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.28□□□□□ -2.36
RPL39P62891 AL035410.1-201ENST00000427409 427 ntBASIC0.28□□□□□ -2.36
RPL39P62891 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.28□□□□□ -2.36
RPL39P62891 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.28□□□□□ -2.36
RPL39P62891 RPS27P22-201ENST00000478056 241 ntBASIC0.28□□□□□ -2.36
RPL39P62891 PRELID3BP4-201ENST00000515476 571 ntBASIC0.28□□□□□ -2.36
RPL39P62891 RNU6-229P-201ENST00000516614 102 ntBASIC0.28□□□□□ -2.36
RPL39P62891 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.28□□□□□ -2.36
RPL39P62891 HSPE1P4-201ENST00000550617 308 ntBASIC0.28□□□□□ -2.36
RPL39P62891 CYP4A27P-201ENST00000567218 190 ntBASIC0.28□□□□□ -2.36
RPL39P62891 AP001269.3-201ENST00000588718 329 ntBASIC0.28□□□□□ -2.36
RPL39P62891 BNIP3P25-201ENST00000596023 559 ntBASIC0.28□□□□□ -2.36
RPL39P62891 VN1R81P-201ENST00000602085 372 ntBASIC0.28□□□□□ -2.36
RPL39P62891 AP005137.2-201ENST00000609238 400 ntBASIC0.28□□□□□ -2.36
RPL39P62891 AC008568.2-201ENST00000623862 2313 ntBASIC0.28□□□□□ -2.36
RPL39P62891 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
RPL39P62891 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.37
RPL39P62891 Y_RNA.595-201ENST00000410403 105 ntBASIC0.27□□□□□ -2.37
RPL39P62891 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.27□□□□□ -2.37
RPL39P62891 USP9YP35-201ENST00000435696 412 ntBASIC0.27□□□□□ -2.37
RPL39P62891 RPL31P20-201ENST00000449593 360 ntBASIC0.27□□□□□ -2.37
RPL39P62891 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.27□□□□□ -2.37
RPL39P62891 PRELID3BP1-201ENST00000457142 540 ntBASIC0.27□□□□□ -2.37
RPL39P62891 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
RPL39P62891 AC112518.2-201ENST00000508565 425 ntBASIC0.27□□□□□ -2.37
RPL39P62891 TRMT112P2-201ENST00000512910 132 ntBASIC0.27□□□□□ -2.37
RPL39P62891 SNORA44.1-201ENST00000517031 108 ntBASIC0.27□□□□□ -2.37
RPL39P62891 OR4U1P-201ENST00000554958 912 ntBASIC0.27□□□□□ -2.37
RPL39P62891 MIR4714-201ENST00000580728 77 ntBASIC0.27□□□□□ -2.37
RPL39P62891 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.27□□□□□ -2.37
RPL39P62891 MTND4P16-201ENST00000466108 1367 ntBASIC0.27□□□□□ -2.37
RPL39P62891 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
RPL39P62891 AC138393.1-203ENST00000327086 343 ntBASIC0.26□□□□□ -2.37
RPL39P62891 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.26□□□□□ -2.37
RPL39P62891 AC244023.1-201ENST00000426884 112 ntBASIC0.26□□□□□ -2.37
RPL39P62891 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.26□□□□□ -2.37
RPL39P62891 MTND4P6-201ENST00000438297 472 ntBASIC0.26□□□□□ -2.37
RPL39P62891 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.26□□□□□ -2.37
RPL39P62891 AL078601.1-201ENST00000444542 271 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC0.26□□□□□ -2.37
RPL39P62891 AC005840.1-201ENST00000498412 377 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.26□□□□□ -2.37
RPL39P62891 AC138853.1-201ENST00000503549 823 ntBASIC0.26□□□□□ -2.37
RPL39P62891 RNU4-57P-201ENST00000515980 135 ntBASIC0.26□□□□□ -2.37
RPL39P62891 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.26□□□□□ -2.37
RPL39P62891 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.26□□□□□ -2.37
RPL39P62891 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.26□□□□□ -2.37
RPL39P62891 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC118273.2-201ENST00000532092 465 ntBASIC0.26□□□□□ -2.37
RPL39P62891 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.26□□□□□ -2.37
RPL39P62891 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.26□□□□□ -2.37
RPL39P62891 MIR4524B-201ENST00000581569 115 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC242498.1-201ENST00000604134 111 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC079395.3-201ENST00000615161 484 ntBASIC0.26□□□□□ -2.37
RPL39P62891 AC243994.1-201ENST00000618627 109 ntBASIC0.26□□□□□ -2.37
RPL39P62891 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.26□□□□□ -2.37
RPL39P62891 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
RPL39P62891 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
RPL39P62891 CUL4AP1-201ENST00000514750 1863 ntBASIC0.25□□□□□ -2.37
RPL39P62891 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.25□□□□□ -2.37
RPL39P62891 DEFB108F-201ENST00000344638 222 ntBASIC0.25□□□□□ -2.37
RPL39P62891 RNU1-93P-201ENST00000364704 169 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AL031577.2-201ENST00000404133 280 ntBASIC0.25□□□□□ -2.37
RPL39P62891 RNU6-272P-201ENST00000411028 104 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.25□□□□□ -2.37
RPL39P62891 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AC098934.3-201ENST00000430450 190 ntBASIC0.25□□□□□ -2.37
RPL39P62891 RPL7P29-201ENST00000437151 728 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AL137159.1-201ENST00000452808 512 ntBASIC0.25□□□□□ -2.37
RPL39P62891 CALM1P2-201ENST00000452941 448 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
RPL39P62891 RNA5SP458-201ENST00000516188 119 ntBASIC0.25□□□□□ -2.37
RPL39P62891 RNA5SP102-201ENST00000516865 106 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.25□□□□□ -2.37
RPL39P62891 AC005668.1-201ENST00000571142 476 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.25□□□□□ -2.37
RPL39P62891 VN1R82P-201ENST00000601481 356 ntBASIC0.25□□□□□ -2.37
RPL39P62891 AL356585.4-201ENST00000623078 1229 ntBASIC0.25□□□□□ -2.37
RPL39P62891 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.25□□□□□ -2.37
RPL39P62891 MIR424-201ENST00000362227 98 ntBASIC0.24□□□□□ -2.37
RPL39P62891 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
RPL39P62891 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
RPL39P62891 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.24□□□□□ -2.37
RPL39P62891 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.24□□□□□ -2.37
RPL39P62891 RPL7P34-201ENST00000433316 712 ntBASIC0.24□□□□□ -2.37
RPL39P62891 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.24□□□□□ -2.37
RPL39P62891 DYNLL1P5-201ENST00000467158 270 ntBASIC0.24□□□□□ -2.37
RPL39P62891 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.24□□□□□ -2.37
RPL39P62891 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.24□□□□□ -2.37
RPL39P62891 AC079140.2-201ENST00000506193 142 ntBASIC0.24□□□□□ -2.37
RPL39P62891 PSMC1P5-201ENST00000512850 177 ntBASIC0.24□□□□□ -2.37
RPL39P62891 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.24□□□□□ -2.37
RPL39P62891 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.24□□□□□ -2.37
RPL39P62891 AC104763.2-201ENST00000604179 382 ntBASIC0.24□□□□□ -2.37
RPL39P62891 AC106900.2-201ENST00000604994 317 ntBASIC0.24□□□□□ -2.37
RPL39P62891 AC116312.1-201ENST00000606841 314 ntBASIC0.24□□□□□ -2.37
RPL39P62891 AC083806.3-201ENST00000614016 455 ntBASIC0.24□□□□□ -2.37
RPL39P62891 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms