Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AP000949.1-201ENST00000438328 629 ntBASIC0.99□□□□□ -2.25
RPS28P62857 RPL21P23-201ENST00000446654 460 ntBASIC0.99□□□□□ -2.25
RPS28P62857 RPL26P28-201ENST00000451325 435 ntBASIC0.99□□□□□ -2.25
RPS28P62857 OFD1P3Y-201ENST00000453312 783 ntBASIC0.99□□□□□ -2.25
RPS28P62857 CECR9-201ENST00000453421 199 ntBASIC0.99□□□□□ -2.25
RPS28P62857 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.99□□□□□ -2.25
RPS28P62857 snoU13.9-201ENST00000458927 103 ntBASIC0.99□□□□□ -2.25
RPS28P62857 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 ANXA2P1-201ENST00000505539 926 ntBASIC0.99□□□□□ -2.25
RPS28P62857 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC010460.2-201ENST00000509054 677 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 AC073544.2-201ENST00000601155 540 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC006023.1-201ENST00000603944 259 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AL355802.3-201ENST00000607571 545 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC068944.2-201ENST00000610373 403 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC010133.1-201ENST00000615809 842 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AL355365.1-201ENST00000616480 294 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC039056.2-201ENST00000622261 511 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AL138713.1-201ENST00000624026 2130 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC244258.1-201ENST00000637553 1071 ntBASIC0.99□□□□□ -2.25
RPS28P62857 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
RPS28P62857 Z99496.1-201ENST00000469424 1477 ntBASIC0.99□□□□□ -2.25
RPS28P62857 MTND5P29-201ENST00000458676 1807 ntBASIC0.99□□□□□ -2.25
RPS28P62857 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
RPS28P62857 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
RPS28P62857 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.98□□□□□ -2.25
RPS28P62857 OR5T3-201ENST00000303059 1023 ntBASIC0.98□□□□□ -2.25
RPS28P62857 SNORD51.1-201ENST00000365405 77 ntBASIC0.98□□□□□ -2.25
RPS28P62857 RNU6-398P-201ENST00000384143 109 ntBASIC0.98□□□□□ -2.25
RPS28P62857 MIR9-1-201ENST00000385198 89 ntBASIC0.98□□□□□ -2.25
RPS28P62857 U3.22-201ENST00000391120 215 ntBASIC0.98□□□□□ -2.25
RPS28P62857 SPTLC1P2-201ENST00000407089 121 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AC127391.1-201ENST00000411737 98 ntBASIC0.98□□□□□ -2.25
RPS28P62857 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
RPS28P62857 ELOCP14-201ENST00000428070 331 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AC027124.2-201ENST00000428249 105 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 MTND1P28-201ENST00000435623 950 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPS28P62857 ELOCP7-201ENST00000439968 331 ntBASIC0.98□□□□□ -2.25
RPS28P62857 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.98□□□□□ -2.25
RPS28P62857 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC0.98□□□□□ -2.25
RPS28P62857 RPS15AP17-201ENST00000470598 390 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AC117522.2-201ENST00000510049 657 ntBASIC0.98□□□□□ -2.25
RPS28P62857 RN7SKP179-201ENST00000516126 217 ntBASIC0.98□□□□□ -2.25
RPS28P62857 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RPS28P62857 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 AP003034.1-201ENST00000534621 422 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AC079598.5-201ENST00000547460 117 ntBASIC0.98□□□□□ -2.25
RPS28P62857 ADAM3B-201ENST00000569937 840 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 AL355802.4-201ENST00000607635 548 ntBASIC0.98□□□□□ -2.25
RPS28P62857 MIR1264-201ENST00000616374 69 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AL359314.1-201ENST00000616913 261 ntBASIC0.98□□□□□ -2.25
RPS28P62857 AL596245.1-201ENST00000618994 362 ntBASIC0.98□□□□□ -2.25
RPS28P62857 MIR7843-201ENST00000622274 79 ntBASIC0.98□□□□□ -2.25
RPS28P62857 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.98□□□□□ -2.25
RPS28P62857 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.98□□□□□ -2.25
RPS28P62857 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC0.98□□□□□ -2.25
RPS28P62857 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPS28P62857 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RPS28P62857 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RPS28P62857 AL121657.1-201ENST00000327215 531 ntBASIC0.97□□□□□ -2.25
RPS28P62857 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RPS28P62857 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 MIR192-201ENST00000384915 110 ntBASIC0.97□□□□□ -2.25
RPS28P62857 MIR550A3-201ENST00000390735 95 ntBASIC0.97□□□□□ -2.25
RPS28P62857 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC0.97□□□□□ -2.25
RPS28P62857 AC092001.1-201ENST00000453012 261 ntBASIC0.97□□□□□ -2.25
RPS28P62857 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 AC026410.2-201ENST00000460281 156 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC017007.3-201ENST00000479865 435 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC011825.1-201ENST00000484967 388 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC011005.2-201ENST00000487324 359 ntBASIC0.97□□□□□ -2.25
RPS28P62857 PRELID3BP5-201ENST00000508612 460 ntBASIC0.97□□□□□ -2.25
RPS28P62857 MTCYBP16-201ENST00000509187 1129 ntBASIC0.97□□□□□ -2.25
RPS28P62857 RNA5SP445-201ENST00000515889 115 ntBASIC0.97□□□□□ -2.25
RPS28P62857 RNA5SP24-201ENST00000516478 95 ntBASIC0.97□□□□□ -2.25
RPS28P62857 IGHVII-60-1-201ENST00000519079 256 ntBASIC0.97□□□□□ -2.25
RPS28P62857 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.97□□□□□ -2.25
RPS28P62857 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.97□□□□□ -2.25
RPS28P62857 AC233266.2-201ENST00000567067 528 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC090615.1-201ENST00000577519 154 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms