Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM3P62310 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.22□□□□□ -2.21
LSM3P62310 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
LSM3P62310 AC024224.1-201ENST00000538284 609 ntBASIC1.22□□□□□ -2.21
LSM3P62310 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM3P62310 AC008269.2-201ENST00000561915 1105 ntBASIC1.22□□□□□ -2.21
LSM3P62310 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM3P62310 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.22□□□□□ -2.21
LSM3P62310 AC078899.2-201ENST00000595282 212 ntBASIC1.22□□□□□ -2.21
LSM3P62310 AL031274.2-201ENST00000599419 203 ntBASIC1.22□□□□□ -2.21
LSM3P62310 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM3P62310 BX322635.1-201ENST00000605804 496 ntBASIC1.22□□□□□ -2.21
LSM3P62310 AC004067.1-201ENST00000608733 700 ntBASIC1.22□□□□□ -2.21
LSM3P62310 FTX_3.1-201ENST00000610451 147 ntBASIC1.22□□□□□ -2.21
LSM3P62310 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM3P62310 IGHVIII-44-202ENST00000636235 289 ntBASIC1.22□□□□□ -2.21
LSM3P62310 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
LSM3P62310 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LSM3P62310 RNU6-115P-201ENST00000364310 107 ntBASIC1.21□□□□□ -2.22
LSM3P62310 RNU6-657P-201ENST00000383904 107 ntBASIC1.21□□□□□ -2.22
LSM3P62310 MIR517C-201ENST00000385103 95 ntBASIC1.21□□□□□ -2.22
LSM3P62310 MIR147B-201ENST00000390185 80 ntBASIC1.21□□□□□ -2.22
LSM3P62310 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LSM3P62310 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AL158823.1-201ENST00000418441 478 ntBASIC1.21□□□□□ -2.22
LSM3P62310 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.21□□□□□ -2.22
LSM3P62310 BX276092.3-201ENST00000424182 230 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AL513185.2-201ENST00000425543 193 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AP000949.1-201ENST00000438328 629 ntBASIC1.21□□□□□ -2.22
LSM3P62310 OR9N1P-202ENST00000494289 481 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AC093801.2-201ENST00000503966 1050 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.21□□□□□ -2.22
LSM3P62310 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.21□□□□□ -2.22
LSM3P62310 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AL132857.1-201ENST00000555180 708 ntBASIC1.21□□□□□ -2.22
LSM3P62310 EIF1AXP2-201ENST00000555940 413 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AC005951.2-201ENST00000576282 495 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AC024619.4-201ENST00000580924 316 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
LSM3P62310 AC018638.7-201ENST00000605836 1114 ntBASIC1.21□□□□□ -2.22
LSM3P62310 AC096586.1-201ENST00000610267 561 ntBASIC1.21□□□□□ -2.22
LSM3P62310 U4atac.1-201ENST00000618345 95 ntBASIC1.21□□□□□ -2.22
LSM3P62310 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LSM3P62310 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
LSM3P62310 UBE2FP1-201ENST00000416536 447 ntBASIC1.2□□□□□ -2.22
LSM3P62310 BPY2DP-201ENST00000422208 265 ntBASIC1.2□□□□□ -2.22
LSM3P62310 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LSM3P62310 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.2□□□□□ -2.22
LSM3P62310 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.2□□□□□ -2.22
LSM3P62310 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
LSM3P62310 MTND6P13-201ENST00000443510 523 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL096803.2-201ENST00000450032 677 ntBASIC1.2□□□□□ -2.22
LSM3P62310 RPS27AP10-201ENST00000496103 208 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC091965.2-201ENST00000512324 613 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC008549.1-201ENST00000512900 643 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM3P62310 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM3P62310 GNAI2P1-201ENST00000541815 315 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL359212.1-201ENST00000556608 614 ntBASIC1.2□□□□□ -2.22
LSM3P62310 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM3P62310 LINC00933-203ENST00000559812 219 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC015720.1-201ENST00000565251 277 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC023824.3-201ENST00000569003 562 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC005261.5-201ENST00000596280 355 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL391813.1-201ENST00000603098 260 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC005229.3-201ENST00000603438 323 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL161729.4-201ENST00000604650 476 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC007038.2-201ENST00000608095 740 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AL121652.1-201ENST00000608851 448 ntBASIC1.2□□□□□ -2.22
LSM3P62310 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.2□□□□□ -2.22
LSM3P62310 AC008443.7-201ENST00000622195 246 ntBASIC1.2□□□□□ -2.22
LSM3P62310 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
LSM3P62310 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LSM3P62310 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
LSM3P62310 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
LSM3P62310 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
LSM3P62310 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.19□□□□□ -2.22
LSM3P62310 RNU6-741P-201ENST00000383889 107 ntBASIC1.19□□□□□ -2.22
LSM3P62310 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
LSM3P62310 SNORA8-201ENST00000384574 139 ntBASIC1.19□□□□□ -2.22
LSM3P62310 VN1R36P-201ENST00000414936 291 ntBASIC1.19□□□□□ -2.22
LSM3P62310 AC096649.2-201ENST00000416186 393 ntBASIC1.19□□□□□ -2.22
LSM3P62310 OR4K6P-201ENST00000416478 897 ntBASIC1.19□□□□□ -2.22
LSM3P62310 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.19□□□□□ -2.22
LSM3P62310 HMGN2P3-201ENST00000433603 273 ntBASIC1.19□□□□□ -2.22
LSM3P62310 HMGN2P5-201ENST00000436882 273 ntBASIC1.19□□□□□ -2.22
LSM3P62310 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.19□□□□□ -2.22
LSM3P62310 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.19□□□□□ -2.22
LSM3P62310 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.19□□□□□ -2.22
LSM3P62310 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.19□□□□□ -2.22
LSM3P62310 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
LSM3P62310 SNORA25.11-201ENST00000515935 105 ntBASIC1.19□□□□□ -2.22
LSM3P62310 RNU6-760P-201ENST00000516078 97 ntBASIC1.19□□□□□ -2.22
LSM3P62310 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.19□□□□□ -2.22
LSM3P62310 HSPA8P13-201ENST00000523715 472 ntBASIC1.19□□□□□ -2.22
LSM3P62310 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.19□□□□□ -2.22
LSM3P62310 AC008127.2-201ENST00000549925 1075 ntBASIC1.19□□□□□ -2.22
LSM3P62310 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms