Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL590704.1-201ENST00000402856 794 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RNU6-193P-201ENST00000410977 107 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RPL21P111-201ENST00000418453 477 ntBASIC3.29□□□□□ -1.88
CDH12P55289 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 RPL7P46-201ENST00000425129 740 ntBASIC3.29□□□□□ -1.88
CDH12P55289 SRIP2-201ENST00000428470 166 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AL121601.2-201ENST00000438019 707 ntBASIC3.29□□□□□ -1.88
CDH12P55289 MTND3P16-201ENST00000452205 344 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC006539.3-201ENST00000454258 129 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RNU7-180P-201ENST00000459240 63 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RN7SL132P-201ENST00000478131 296 ntBASIC3.29□□□□□ -1.88
CDH12P55289 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH12P55289 AC110768.1-201ENST00000509222 400 ntBASIC3.29□□□□□ -1.88
CDH12P55289 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH12P55289 RNU4-29P-201ENST00000515943 174 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RNU6-507P-201ENST00000516045 100 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RNU6-123P-201ENST00000516163 102 ntBASIC3.29□□□□□ -1.88
CDH12P55289 Y_RNA.702-201ENST00000516843 96 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 AC007991.1-201ENST00000522680 631 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 CENPUP1-201ENST00000526649 1202 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
CDH12P55289 MIR5583-1-201ENST00000580941 59 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH12P55289 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH12P55289 MIR4424-201ENST00000585257 86 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC104763.2-201ENST00000604179 382 ntBASIC3.29□□□□□ -1.88
CDH12P55289 BNIP3P10-201ENST00000605360 577 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AC012409.4-201ENST00000612923 249 ntBASIC3.29□□□□□ -1.88
CDH12P55289 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH12P55289 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH12P55289 SDAD1P2-201ENST00000441308 2028 ntBASIC3.29□□□□□ -1.88
CDH12P55289 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDH12P55289 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH12P55289 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH12P55289 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH12P55289 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH12P55289 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH12P55289 Y_RNA.70-201ENST00000362886 110 ntBASIC3.28□□□□□ -1.88
CDH12P55289 Y_RNA.279-201ENST00000364763 95 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RNA5SP189-201ENST00000364920 115 ntBASIC3.28□□□□□ -1.88
CDH12P55289 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH12P55289 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH12P55289 RNU6-38P-201ENST00000384085 107 ntBASIC3.28□□□□□ -1.88
CDH12P55289 MIR514A2-201ENST00000385131 88 ntBASIC3.28□□□□□ -1.88
CDH12P55289 MIR514A3-201ENST00000385132 88 ntBASIC3.28□□□□□ -1.88
CDH12P55289 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH12P55289 RNU6-328P-201ENST00000390887 106 ntBASIC3.28□□□□□ -1.88
CDH12P55289 SNORD37.1-201ENST00000390968 65 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RNU6-550P-201ENST00000391057 101 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RNU6-332P-201ENST00000391193 108 ntBASIC3.28□□□□□ -1.88
CDH12P55289 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH12P55289 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH12P55289 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH12P55289 AC091390.3-201ENST00000426478 338 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RPL7L1P10-201ENST00000427790 463 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH12P55289 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
CDH12P55289 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
CDH12P55289 FABP5P13-201ENST00000452144 328 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RNU6-333P-201ENST00000459117 107 ntBASIC3.28□□□□□ -1.88
CDH12P55289 RPS4XP22-201ENST00000480755 780 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AC008628.2-201ENST00000502605 298 ntBASIC3.28□□□□□ -1.88
CDH12P55289 MTCO3P9-201ENST00000506989 781 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AC026402.1-201ENST00000513642 170 ntBASIC3.28□□□□□ -1.88
CDH12P55289 SNORA70.16-201ENST00000516390 95 ntBASIC3.28□□□□□ -1.88
CDH12P55289 Y_RNA.689-201ENST00000516589 107 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH12P55289 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH12P55289 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH12P55289 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH12P55289 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
CDH12P55289 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CDH12P55289 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 AC007687.1-201ENST00000602704 304 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AC130324.3-201ENST00000614165 542 ntBASIC3.28□□□□□ -1.88
CDH12P55289 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
CDH12P55289 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDH12P55289 AL133383.2-201ENST00000622958 2336 ntBASIC3.27□□□□□ -1.89
CDH12P55289 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms