Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-799P-201ENST00000363567 107 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NR1H2P55055 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NR1H2P55055 RNU6-1103P-201ENST00000384150 107 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 MIR7-3-201ENST00000384898 110 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 MIR449B-201ENST00000384995 97 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 SNORA3.3-201ENST00000408712 125 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 FCF1P9-201ENST00000412546 282 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 GPR143P-201ENST00000434155 205 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.44□□□□□ -1.86
NR1H2P55055 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.44□□□□□ -1.86
NR1H2P55055 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.44□□□□□ -1.86
NR1H2P55055 AC093392.2-201ENST00000450682 337 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 RNU7-23P-201ENST00000459465 62 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AC104472.2-201ENST00000469035 601 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 RN7SL323P-201ENST00000494712 295 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AC117522.1-201ENST00000509821 380 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 RNA5SP179-201ENST00000517284 121 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.44□□□□□ -1.86
NR1H2P55055 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.44□□□□□ -1.86
NR1H2P55055 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.44□□□□□ -1.86
NR1H2P55055 AC098848.2-201ENST00000588023 330 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 BNIP3P9-201ENST00000603714 553 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 Z84480.1-201ENST00000605131 311 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 AC099778.2-201ENST00000610904 211 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NR1H2P55055 FP236240.3-201ENST00000623061 327 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 MTND5P42-201ENST00000637720 498 ntBASIC3.44□□□□□ -1.86
NR1H2P55055 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NR1H2P55055 ZNF285B-201ENST00000561698 1767 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NR1H2P55055 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H2P55055 MAPK10-322ENST00000641485 4530 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 API5P2-201ENST00000397055 1498 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC093908.1-201ENST00000623125 8092 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 FTLP6-201ENST00000355274 422 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 RNU6-270P-201ENST00000364131 105 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 MIR199A2-201ENST00000385289 110 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 MTCO3P40-201ENST00000392516 676 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 RN7SKP156-201ENST00000410308 342 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 RNU2-39P-201ENST00000410604 198 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 AC245291.1-201ENST00000419501 328 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC099548.1-201ENST00000421443 426 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 HSPE1P1-201ENST00000421494 318 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 ISCA1P1-201ENST00000426679 387 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.43□□□□□ -1.86
NR1H2P55055 C8orf59P1-201ENST00000429930 303 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H2P55055 USP9YP28-201ENST00000435142 589 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 SNRPEP9-201ENST00000436794 238 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H2P55055 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 PSPHP1-201ENST00000450062 261 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC092185.1-201ENST00000491371 97 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 RNA5SP164-201ENST00000516533 110 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 SNORA31.21-201ENST00000517180 77 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 MTND1P5-201ENST00000517906 940 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC087369.1-201ENST00000520775 996 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H2P55055 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H2P55055 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 SRGNP1-201ENST00000603392 451 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H2P55055 AC091167.4-201ENST00000605079 184 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 AC007619.2-201ENST00000605743 379 ntBASIC3.43□□□□□ -1.86
NR1H2P55055 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H2P55055 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H2P55055 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NR1H2P55055 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H2P55055 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC008669.1-201ENST00000565823 2178 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
NR1H2P55055 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H2P55055 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NR1H2P55055 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNU6-1097P-201ENST00000363586 107 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 SMIM11P1-201ENST00000369586 178 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNU6-946P-201ENST00000383878 107 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNU6-1027P-201ENST00000383998 107 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NR1H2P55055 RNU2-68P-201ENST00000410878 191 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RPS12P24-201ENST00000412619 387 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 UBE2V1P10-201ENST00000414685 269 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.42□□□□□ -1.86
NR1H2P55055 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
NR1H2P55055 AP000907.1-201ENST00000428428 510 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC091286.1-201ENST00000431233 461 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 MTND3P21-201ENST00000433774 331 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 NDUFB1P1-201ENST00000435191 180 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H2P55055 NOTCH2P1-201ENST00000443481 624 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms