Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MTAPP1-201ENST00000489154 819 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AC006499.2-201ENST00000513470 337 ntBASIC2.61□□□□□ -1.99
MSH6P52701 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.61□□□□□ -1.99
MSH6P52701 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.61□□□□□ -1.99
MSH6P52701 FAM92A1P1-201ENST00000528023 890 ntBASIC2.61□□□□□ -1.99
MSH6P52701 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MSH6P52701 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.61□□□□□ -1.99
MSH6P52701 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.61□□□□□ -1.99
MSH6P52701 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 AC021749.1-201ENST00000604322 607 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AC008962.1-201ENST00000605729 304 ntBASIC2.61□□□□□ -1.99
MSH6P52701 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AL356473.1-201ENST00000406203 1408 ntBASIC2.61□□□□□ -1.99
MSH6P52701 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
MSH6P52701 RNU6-799P-201ENST00000363567 107 ntBASIC2.61□□□□□ -1.99
MSH6P52701 RNY1P14-201ENST00000384426 108 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AL136310.1-201ENST00000404926 654 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.61□□□□□ -1.99
MSH6P52701 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.61□□□□□ -1.99
MSH6P52701 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.61□□□□□ -1.99
MSH6P52701 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 FCF1P6-201ENST00000456841 595 ntBASIC2.61□□□□□ -1.99
MSH6P52701 RNA5SP310-201ENST00000459084 116 ntBASIC2.61□□□□□ -1.99
MSH6P52701 RPS29P11-201ENST00000496507 171 ntBASIC2.61□□□□□ -1.99
MSH6P52701 MTND3P3-201ENST00000505004 126 ntBASIC2.61□□□□□ -1.99
MSH6P52701 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
MSH6P52701 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
MSH6P52701 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.61□□□□□ -1.99
MSH6P52701 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 AL390208.1-201ENST00000605885 644 ntBASIC2.61□□□□□ -1.99
MSH6P52701 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.61□□□□□ -1.99
MSH6P52701 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.61□□□□□ -1.99
MSH6P52701 MTND4P9-201ENST00000507819 1346 ntBASIC2.61□□□□□ -1.99
MSH6P52701 AL079343.1-201ENST00000572358 1771 ntBASIC2.6□□□□□ -1.99
MSH6P52701 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MSH6P52701 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 TIMM9P2-201ENST00000419324 266 ntBASIC2.6□□□□□ -1.99
MSH6P52701 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.6□□□□□ -1.99
MSH6P52701 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.6□□□□□ -1.99
MSH6P52701 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.6□□□□□ -1.99
MSH6P52701 AL359385.1-201ENST00000456509 365 ntBASIC2.6□□□□□ -1.99
MSH6P52701 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.6□□□□□ -1.99
MSH6P52701 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.6□□□□□ -1.99
MSH6P52701 TMF1P1-201ENST00000576058 373 ntBASIC2.6□□□□□ -1.99
MSH6P52701 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
MSH6P52701 AC013444.2-201ENST00000603317 787 ntBASIC2.6□□□□□ -1.99
MSH6P52701 AC097504.2-201ENST00000608088 454 ntBASIC2.6□□□□□ -1.99
MSH6P52701 AL121652.1-201ENST00000608851 448 ntBASIC2.6□□□□□ -1.99
MSH6P52701 AC011330.2-201ENST00000621680 635 ntBASIC2.6□□□□□ -1.99
MSH6P52701 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.6□□□□□ -1.99
MSH6P52701 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.6□□□□□ -1.99
MSH6P52701 AL445984.1-201ENST00000637834 659 ntBASIC2.6□□□□□ -1.99
MSH6P52701 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
MSH6P52701 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH6P52701 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.59□□□□□ -2
MSH6P52701 DEFB108F-201ENST00000344638 222 ntBASIC2.59□□□□□ -2
MSH6P52701 RNA5SP160-201ENST00000364866 120 ntBASIC2.59□□□□□ -2
MSH6P52701 RNU6-392P-201ENST00000364926 101 ntBASIC2.59□□□□□ -2
MSH6P52701 MIR620-201ENST00000385232 95 ntBASIC2.59□□□□□ -2
MSH6P52701 ERHP2-201ENST00000402323 299 ntBASIC2.59□□□□□ -2
MSH6P52701 RNU2-43P-201ENST00000410306 190 ntBASIC2.59□□□□□ -2
MSH6P52701 RNA5SP338-201ENST00000410495 85 ntBASIC2.59□□□□□ -2
MSH6P52701 MTATP6P20-201ENST00000414147 562 ntBASIC2.59□□□□□ -2
MSH6P52701 AL356320.2-201ENST00000417263 507 ntBASIC2.59□□□□□ -2
MSH6P52701 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.59□□□□□ -2
MSH6P52701 AC024082.2-201ENST00000434771 238 ntBASIC2.59□□□□□ -2
MSH6P52701 SDCBPP1-201ENST00000440192 890 ntBASIC2.59□□□□□ -2
MSH6P52701 CBWD4P-201ENST00000445695 655 ntBASIC2.59□□□□□ -2
MSH6P52701 AC007327.1-201ENST00000447461 264 ntBASIC2.59□□□□□ -2
MSH6P52701 MTND2P39-201ENST00000457230 764 ntBASIC2.59□□□□□ -2
MSH6P52701 RNU6-717P-201ENST00000459076 104 ntBASIC2.59□□□□□ -2
MSH6P52701 AC079804.2-201ENST00000490376 200 ntBASIC2.59□□□□□ -2
MSH6P52701 Y_RNA.670-201ENST00000516255 105 ntBASIC2.59□□□□□ -2
MSH6P52701 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.59□□□□□ -2
MSH6P52701 AC021451.1-201ENST00000523498 1129 ntBASIC2.59□□□□□ -2
MSH6P52701 AP001804.3-201ENST00000525146 880 ntBASIC2.59□□□□□ -2
MSH6P52701 DEFB108D-201ENST00000527787 222 ntBASIC2.59□□□□□ -2
MSH6P52701 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
MSH6P52701 AC125611.2-201ENST00000551907 647 ntBASIC2.59□□□□□ -2
MSH6P52701 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -2
MSH6P52701 AC019159.1-201ENST00000605094 187 ntBASIC2.59□□□□□ -2
MSH6P52701 AL121917.1-203ENST00000605534 577 ntBASIC2.59□□□□□ -2
MSH6P52701 AP002826.1-201ENST00000608835 315 ntBASIC2.59□□□□□ -2
MSH6P52701 AL512598.1-201ENST00000610158 273 ntBASIC2.59□□□□□ -2
MSH6P52701 MIR6504-201ENST00000613520 61 ntBASIC2.59□□□□□ -2
MSH6P52701 AL357080.1-201ENST00000617394 239 ntBASIC2.59□□□□□ -2
MSH6P52701 MIR6076-201ENST00000617521 113 ntBASIC2.59□□□□□ -2
MSH6P52701 AP000553.5-201ENST00000641933 54 ntBASIC2.59□□□□□ -2
MSH6P52701 CKAP2P1-201ENST00000555477 2049 ntBASIC2.58□□□□□ -2
MSH6P52701 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MSH6P52701 RNU6-28P-201ENST00000362378 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms