Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.29□□□□□ -2.04
LHX2P50458 HSPE1P6-201ENST00000479457 291 ntBASIC2.29□□□□□ -2.04
LHX2P50458 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LHX2P50458 AL359273.1-201ENST00000510918 627 ntBASIC2.29□□□□□ -2.04
LHX2P50458 AC106038.2-201ENST00000520706 568 ntBASIC2.29□□□□□ -2.04
LHX2P50458 HMGN1P28-201ENST00000521340 364 ntBASIC2.29□□□□□ -2.04
LHX2P50458 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.29□□□□□ -2.04
LHX2P50458 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.29□□□□□ -2.04
LHX2P50458 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX2P50458 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.29□□□□□ -2.04
LHX2P50458 MIR3921-201ENST00000577308 85 ntBASIC2.29□□□□□ -2.04
LHX2P50458 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.29□□□□□ -2.04
LHX2P50458 TPMTP1-201ENST00000592307 737 ntBASIC2.29□□□□□ -2.04
LHX2P50458 RPL23AP78-201ENST00000599928 470 ntBASIC2.29□□□□□ -2.04
LHX2P50458 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX2P50458 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.29□□□□□ -2.04
LHX2P50458 AL603758.1-201ENST00000618654 241 ntBASIC2.29□□□□□ -2.04
LHX2P50458 AL159972.1-201ENST00000625150 448 ntBASIC2.29□□□□□ -2.04
LHX2P50458 MIR4275-201ENST00000636486 87 ntBASIC2.29□□□□□ -2.04
LHX2P50458 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LHX2P50458 AC099654.7-201ENST00000635788 2127 ntBASIC2.29□□□□□ -2.04
LHX2P50458 DDX10P1-201ENST00000448545 1933 ntBASIC2.29□□□□□ -2.04
LHX2P50458 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.28□□□□□ -2.04
LHX2P50458 PABPC1P9-201ENST00000426076 1612 ntBASIC2.28□□□□□ -2.04
LHX2P50458 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AL359693.1-201ENST00000614959 2407 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RNU4-82P-201ENST00000362443 140 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RNU6-223P-201ENST00000362830 107 ntBASIC2.28□□□□□ -2.04
LHX2P50458 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LHX2P50458 RNU6-432P-201ENST00000384196 109 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RNY3P9-201ENST00000384727 106 ntBASIC2.28□□□□□ -2.04
LHX2P50458 MIR19A-201ENST00000384878 82 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
LHX2P50458 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.28□□□□□ -2.04
LHX2P50458 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.28□□□□□ -2.04
LHX2P50458 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC018630.2-202ENST00000422992 927 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX2P50458 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.28□□□□□ -2.04
LHX2P50458 UBE2D3P4-201ENST00000441973 436 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
LHX2P50458 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 RPL31P60-201ENST00000478450 367 ntBASIC2.28□□□□□ -2.04
LHX2P50458 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LHX2P50458 AC009901.1-201ENST00000506703 541 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC118465.1-201ENST00000513820 1271 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC116347.2-201ENST00000514912 523 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RN7SKP24-201ENST00000515888 284 ntBASIC2.28□□□□□ -2.04
LHX2P50458 RNU6-798P-201ENST00000516912 103 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
LHX2P50458 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC109446.2-201ENST00000567872 497 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.28□□□□□ -2.04
LHX2P50458 MIR3670-2-201ENST00000582974 65 ntBASIC2.28□□□□□ -2.04
LHX2P50458 MIR3670-1-201ENST00000584160 65 ntBASIC2.28□□□□□ -2.04
LHX2P50458 MIR3670-3-201ENST00000584855 65 ntBASIC2.28□□□□□ -2.04
LHX2P50458 OR10AB1P-201ENST00000609613 938 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AL355472.4-201ENST00000610233 626 ntBASIC2.28□□□□□ -2.04
LHX2P50458 MIR3670-4-201ENST00000612260 65 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 TUG1_2.1-201ENST00000614234 87 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC022079.1-201ENST00000621546 602 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 AC002064.3-201ENST00000623448 346 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AC112204.3-201ENST00000623822 332 ntBASIC2.28□□□□□ -2.04
LHX2P50458 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
LHX2P50458 AC093591.3-201ENST00000634516 308 ntBASIC2.28□□□□□ -2.04
LHX2P50458 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
LHX2P50458 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
LHX2P50458 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.27□□□□□ -2.05
LHX2P50458 Y_RNA.46-201ENST00000362695 102 ntBASIC2.27□□□□□ -2.05
LHX2P50458 RNU5A-1-201ENST00000362698 116 ntBASIC2.27□□□□□ -2.05
LHX2P50458 SNORA25.6-201ENST00000364121 118 ntBASIC2.27□□□□□ -2.05
LHX2P50458 RNA5SP139-201ENST00000364340 117 ntBASIC2.27□□□□□ -2.05
LHX2P50458 SNORA23-201ENST00000365128 182 ntBASIC2.27□□□□□ -2.05
LHX2P50458 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
LHX2P50458 RPS20P2-201ENST00000402520 389 ntBASIC2.27□□□□□ -2.05
LHX2P50458 MTCYBP36-201ENST00000404146 440 ntBASIC2.27□□□□□ -2.05
LHX2P50458 AC080125.1-201ENST00000414888 684 ntBASIC2.27□□□□□ -2.05
LHX2P50458 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.27□□□□□ -2.05
LHX2P50458 AL049734.2-201ENST00000441066 616 ntBASIC2.27□□□□□ -2.05
LHX2P50458 MTND1P30-201ENST00000441241 901 ntBASIC2.27□□□□□ -2.05
LHX2P50458 BMI1P1-201ENST00000445879 941 ntBASIC2.27□□□□□ -2.05
LHX2P50458 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LHX2P50458 AP000852.1-201ENST00000472460 573 ntBASIC2.27□□□□□ -2.05
LHX2P50458 AC126182.1-201ENST00000478134 357 ntBASIC2.27□□□□□ -2.05
LHX2P50458 AC109486.1-201ENST00000486833 374 ntBASIC2.27□□□□□ -2.05
LHX2P50458 RPS15AP36-201ENST00000492022 382 ntBASIC2.27□□□□□ -2.05
LHX2P50458 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.27□□□□□ -2.05
LHX2P50458 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
LHX2P50458 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.27□□□□□ -2.05
LHX2P50458 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.27□□□□□ -2.05
LHX2P50458 AC025881.1-201ENST00000518851 512 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms