Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL034408.1-202ENST00000636088 415 ntBASIC4.46□□□□□ -1.7
MRE11P49959 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRE11P49959 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
MRE11P49959 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MRE11P49959 AL158163.1-201ENST00000603915 1649 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MRE11P49959 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
MRE11P49959 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AL139276.1-201ENST00000311910 1001 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RNU6-552P-201ENST00000362869 119 ntBASIC4.45□□□□□ -1.7
MRE11P49959 Y_RNA.100-201ENST00000363141 102 ntBASIC4.45□□□□□ -1.7
MRE11P49959 Y_RNA.132-201ENST00000363421 102 ntBASIC4.45□□□□□ -1.7
MRE11P49959 SNORA62.1-201ENST00000364287 154 ntBASIC4.45□□□□□ -1.7
MRE11P49959 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.45□□□□□ -1.7
MRE11P49959 Y_RNA.387-201ENST00000383918 102 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RNU6-38P-201ENST00000384085 107 ntBASIC4.45□□□□□ -1.7
MRE11P49959 MIR183-201ENST00000384958 110 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RNU6-903P-201ENST00000391270 109 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RPS15AP40-201ENST00000419621 391 ntBASIC4.45□□□□□ -1.7
MRE11P49959 HSPE1P1-201ENST00000421494 318 ntBASIC4.45□□□□□ -1.7
MRE11P49959 OR2AS1P-201ENST00000427827 319 ntBASIC4.45□□□□□ -1.7
MRE11P49959 TXNP1-201ENST00000441872 371 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RNU6-333P-201ENST00000459117 107 ntBASIC4.45□□□□□ -1.7
MRE11P49959 SNORD19B-201ENST00000459623 84 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RPL21P99-201ENST00000480369 423 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AF213884.1-201ENST00000488102 463 ntBASIC4.45□□□□□ -1.7
MRE11P49959 RPS15AP36-201ENST00000492022 382 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.45□□□□□ -1.7
MRE11P49959 AC008958.1-201ENST00000511047 682 ntBASIC4.45□□□□□ -1.7
MRE11P49959 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.45□□□□□ -1.7
MRE11P49959 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.45□□□□□ -1.7
MRE11P49959 MIR4775-201ENST00000581168 75 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AC005255.1-201ENST00000593748 216 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AC004908.2-201ENST00000609090 574 ntBASIC4.45□□□□□ -1.7
MRE11P49959 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.45□□□□□ -1.7
MRE11P49959 AC092628.2-201ENST00000622492 339 ntBASIC4.45□□□□□ -1.7
MRE11P49959 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.45□□□□□ -1.7
MRE11P49959 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRE11P49959 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
MRE11P49959 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
MRE11P49959 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.45□□□□□ -1.7
MRE11P49959 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 AC116667.1-201ENST00000604855 2072 ntBASIC4.44□□□□□ -1.7
MRE11P49959 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 RNVU1-14-201ENST00000384770 164 ntBASIC4.44□□□□□ -1.7
MRE11P49959 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MRE11P49959 RNU6-278P-201ENST00000390945 109 ntBASIC4.44□□□□□ -1.7
MRE11P49959 ENSAP1-201ENST00000392855 326 ntBASIC4.44□□□□□ -1.7
MRE11P49959 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC108032.1-201ENST00000416706 207 ntBASIC4.44□□□□□ -1.7
MRE11P49959 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 AL451054.2-201ENST00000420896 202 ntBASIC4.44□□□□□ -1.7
MRE11P49959 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 USP9YP7-201ENST00000436723 430 ntBASIC4.44□□□□□ -1.7
MRE11P49959 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.44□□□□□ -1.7
MRE11P49959 USP9YP32-201ENST00000452432 430 ntBASIC4.44□□□□□ -1.7
MRE11P49959 RNU7-182P-201ENST00000459009 62 ntBASIC4.44□□□□□ -1.7
MRE11P49959 RNU7-59P-201ENST00000459101 61 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC116562.3-201ENST00000506136 177 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC092436.1-201ENST00000506450 503 ntBASIC4.44□□□□□ -1.7
MRE11P49959 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 RNU6-327P-201ENST00000516270 127 ntBASIC4.44□□□□□ -1.7
MRE11P49959 RNU6-1045P-201ENST00000516321 107 ntBASIC4.44□□□□□ -1.7
MRE11P49959 HMGB1P41-201ENST00000520234 440 ntBASIC4.44□□□□□ -1.7
MRE11P49959 RPL7P20-201ENST00000520308 745 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 AC068587.5-201ENST00000528506 175 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AP000857.1-201ENST00000532151 543 ntBASIC4.44□□□□□ -1.7
MRE11P49959 OR5B10P-201ENST00000532869 642 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 AC020661.2-201ENST00000560114 134 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC093249.1-201ENST00000567049 203 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC025627.2-201ENST00000576220 160 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.44□□□□□ -1.7
MRE11P49959 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.44□□□□□ -1.7
MRE11P49959 MIR5684-201ENST00000585074 65 ntBASIC4.44□□□□□ -1.7
MRE11P49959 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.44□□□□□ -1.7
MRE11P49959 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 AL133216.2-202ENST00000634512 349 ntBASIC4.44□□□□□ -1.7
MRE11P49959 MIR7153-201ENST00000637758 57 ntBASIC4.44□□□□□ -1.7
MRE11P49959 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRE11P49959 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.44□□□□□ -1.7
MRE11P49959 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.44□□□□□ -1.7
MRE11P49959 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MRE11P49959 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
MRE11P49959 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms