Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 BX842559.1-201ENST00000419615 532 ntBASIC3.37□□□□□ -1.87
SOX2P48431 TBCAP1-201ENST00000436520 327 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX2P48431 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX2P48431 PPIAP15-201ENST00000479662 484 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX2P48431 RNU6-189P-201ENST00000516120 101 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AC087369.1-201ENST00000520775 996 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AP000763.2-201ENST00000540641 163 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.37□□□□□ -1.87
SOX2P48431 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX2P48431 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.37□□□□□ -1.87
SOX2P48431 OR11H5P-201ENST00000554039 926 ntBASIC3.37□□□□□ -1.87
SOX2P48431 SCOCP1-201ENST00000554676 349 ntBASIC3.37□□□□□ -1.87
SOX2P48431 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX2P48431 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 BNIP3P25-201ENST00000596023 559 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AL022345.1-201ENST00000607292 135 ntBASIC3.37□□□□□ -1.87
SOX2P48431 MIR15A-201ENST00000607334 83 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.37□□□□□ -1.87
SOX2P48431 AC107294.1-201ENST00000609524 467 ntBASIC3.37□□□□□ -1.87
SOX2P48431 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 AL132765.2-201ENST00000610812 351 ntBASIC3.37□□□□□ -1.87
SOX2P48431 U2.17-201ENST00000611454 95 ntBASIC3.37□□□□□ -1.87
SOX2P48431 MIR8059-201ENST00000620427 81 ntBASIC3.37□□□□□ -1.87
SOX2P48431 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AP003400.5-201ENST00000624827 617 ntBASIC3.37□□□□□ -1.87
SOX2P48431 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX2P48431 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
SOX2P48431 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SOX2P48431 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
SOX2P48431 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SOX2P48431 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX2P48431 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.36□□□□□ -1.87
SOX2P48431 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 UBE2L2-201ENST00000254302 429 ntBASIC3.36□□□□□ -1.87
SOX2P48431 SNORA31-201ENST00000362607 130 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RNU6-715P-201ENST00000365204 103 ntBASIC3.36□□□□□ -1.87
SOX2P48431 Y_RNA.414-201ENST00000384011 101 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RNU6-1013P-201ENST00000384180 107 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RNU6-434P-201ENST00000384376 107 ntBASIC3.36□□□□□ -1.87
SOX2P48431 Y_RNA.509-201ENST00000384506 99 ntBASIC3.36□□□□□ -1.87
SOX2P48431 BTF3L4P3-201ENST00000418879 476 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RPL21P109-201ENST00000422213 475 ntBASIC3.36□□□□□ -1.87
SOX2P48431 NDUFB4P7-201ENST00000423198 363 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AL590383.1-201ENST00000428602 75 ntBASIC3.36□□□□□ -1.87
SOX2P48431 DNAJC19P7-201ENST00000428811 344 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 VDAC1P3-201ENST00000434069 851 ntBASIC3.36□□□□□ -1.87
SOX2P48431 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.36□□□□□ -1.87
SOX2P48431 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 RPS29P33-201ENST00000456717 146 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RPL21P93-201ENST00000480465 489 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AC105137.1-201ENST00000484355 562 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AC091167.1-201ENST00000492017 396 ntBASIC3.36□□□□□ -1.87
SOX2P48431 HIGD1AP13-201ENST00000509878 289 ntBASIC3.36□□□□□ -1.87
SOX2P48431 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
SOX2P48431 SNORA70.16-201ENST00000516390 95 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RNU6-1256P-201ENST00000516539 103 ntBASIC3.36□□□□□ -1.87
SOX2P48431 RNU6-914P-201ENST00000516749 109 ntBASIC3.36□□□□□ -1.87
SOX2P48431 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 HIGD1AP5-201ENST00000529959 259 ntBASIC3.36□□□□□ -1.87
SOX2P48431 GLYCAM1-201ENST00000546596 285 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 AC026464.5-201ENST00000562497 722 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SOX2P48431 CTHRC1P1-201ENST00000605383 469 ntBASIC3.36□□□□□ -1.87
SOX2P48431 AP000346.3-201ENST00000622821 210 ntBASIC3.36□□□□□ -1.87
SOX2P48431 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SOX2P48431 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
SOX2P48431 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.36□□□□□ -1.87
SOX2P48431 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SOX2P48431 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SOX2P48431 HSPA8P4-201ENST00000511877 1920 ntBASIC3.35□□□□□ -1.87
SOX2P48431 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SOX2P48431 Y_RNA.167-201ENST00000363735 109 ntBASIC3.35□□□□□ -1.87
SOX2P48431 SNORD113-7-201ENST00000363762 77 ntBASIC3.35□□□□□ -1.87
SOX2P48431 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SOX2P48431 Y_RNA.399-201ENST00000383955 105 ntBASIC3.35□□□□□ -1.87
SOX2P48431 Y_RNA.535-201ENST00000384612 99 ntBASIC3.35□□□□□ -1.87
SOX2P48431 MIR585-201ENST00000384887 94 ntBASIC3.35□□□□□ -1.87
SOX2P48431 RNA5SP219-201ENST00000390940 113 ntBASIC3.35□□□□□ -1.87
SOX2P48431 EIF4E2P1-201ENST00000393781 255 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL139397.2-201ENST00000404529 772 ntBASIC3.35□□□□□ -1.87
SOX2P48431 RNU4-6P-201ENST00000410804 122 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.35□□□□□ -1.87
SOX2P48431 BX682237.1-201ENST00000415016 335 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms