Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CXCL12P48061 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CXCL12P48061 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
CXCL12P48061 AC008568.2-201ENST00000623862 2313 ntBASIC2.16□□□□□ -2.06
CXCL12P48061 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.15□□□□□ -2.06
CXCL12P48061 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 RNU5A-1-201ENST00000362698 116 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6-359P-201ENST00000365466 108 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6-744P-201ENST00000365557 107 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6-1316P-201ENST00000384242 108 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 SNORA1.3-201ENST00000384676 136 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 MIR583-201ENST00000384846 75 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6-1197P-201ENST00000391183 107 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AL356421.1-201ENST00000403255 413 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 Y_RNA.595-201ENST00000410403 105 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 AL117351.1-201ENST00000438864 766 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CXCL12P48061 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
CXCL12P48061 USP9YP10-201ENST00000454868 628 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC027673.1-201ENST00000456245 405 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC021382.1-201ENST00000483523 359 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AL049874.1-201ENST00000489560 388 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC024589.1-201ENST00000512207 263 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 RNU6-798P-201ENST00000516912 103 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.15□□□□□ -2.07
CXCL12P48061 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 ELOCP31-201ENST00000540463 467 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 MIR3921-201ENST00000577308 85 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC011260.1-201ENST00000578420 472 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.15□□□□□ -2.07
CXCL12P48061 AL596327.1-201ENST00000603629 213 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC090186.1-201ENST00000605991 572 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 AC024560.3-201ENST00000608482 349 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC103710.1-201ENST00000610003 901 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC090132.2-201ENST00000615881 347 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AL391262.2-201ENST00000622466 494 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 AC027309.3-201ENST00000623419 351 ntBASIC2.15□□□□□ -2.07
CXCL12P48061 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CXCL12P48061 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.15□□□□□ -2.07
CXCL12P48061 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
CXCL12P48061 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CXCL12P48061 SNORA4.1-201ENST00000364263 144 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 RNU6-1078P-201ENST00000364522 103 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 RNU6-83P-201ENST00000384568 112 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 RNU6-114P-201ENST00000384704 105 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 MIR513B-201ENST00000385136 84 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CXCL12P48061 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 CYCSP49-201ENST00000420810 319 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 TXNL1P1-201ENST00000429528 554 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC129850.1-201ENST00000436203 508 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL12P48061 SNRPEP7-201ENST00000438350 220 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.14□□□□□ -2.07
CXCL12P48061 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 AL031183.1-201ENST00000457667 207 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC104563.1-201ENST00000476147 376 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC147055.4-201ENST00000504399 745 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 RPL37P25-201ENST00000507308 276 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CXCL12P48061 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 MTND4P33-201ENST00000556706 766 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.14□□□□□ -2.07
CXCL12P48061 MIR4446-201ENST00000578505 67 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC112220.3-201ENST00000605502 502 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC007349.4-201ENST00000608114 532 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC027449.1-201ENST00000608890 407 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AL161734.1-201ENST00000609720 557 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC092106.3-201ENST00000611308 722 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 AL603758.1-201ENST00000618654 241 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AL356266.1-201ENST00000623311 483 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
CXCL12P48061 AC005832.2-201ENST00000538921 1430 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms